On November 11, 2001, top Taliban leader Mullah Omar concedes defeat and orders thousands of Taliban to retreat to Pakistan. Within a week, large sections of Afghanistan are abandoned by the Taliban. The Northern Alliance, however, does not have the means or the support to occupy those areas, and warlords take effective control of most of the country. On November 19, the New York Times reports, “The galaxy of warlords who tore Afghanistan apart in the early 1990s and who were vanquished by the Taliban because of their corruption and perfidy are back on their thrones, poised to exercise power in the ways they always have.” The warlords all claim some form of loyalty to the Northern Alliance, but some of the same warlords had previously been allied with the Taliban and bin Laden. For instance, the new ruler of Jalalabad let bin Laden move from Sudan to Jalalabad in 1996. [New York Times, 11/15/2001; Guardian, 11/15/2001; New York Times, 11/19/2001] For the next few weeks, there is widespread “chaos, rape, murder, and pillaging” in most of Afghanistan as old scores are settled. The Western media does little reporting on the brutality of the situation. [Observer, 12/2/2001] The central Afghanistan government will later officially confirm the warlords’ positions with governor and minister titles (see June 20, 2002). In late 2005, it will be reported that warlords generally still retain their positions and power, even after regional elections. [Independent, 10/8/2005] The US made a conscious decision shortly after 9/11 not to allow peacekeepers outside of the capital city of Kabul, creating a power vacuum that was filled by the warlords (see Late 2001). Further, in some cases the US military facilitates the return of former warlords. For instance, Gul Agha Sherzai ruled the Kandahar area in the early 1990s; his rule was notorious for bribery, extortion, drug dealing, and widespread theft. Yet the US arms his militia and US Special Forces personally escort him back to Kandahar, and he will become governor of Kandahar province. [New York Times, 1/6/2002; GlobalSecurity (.org), 4/27/2005] In 2003, Jane’s Terrorism and Security Monitor will look back at the US decisions in late 2001 and opine, “Perhaps the most serious tactical error was the restoration of warlords in Afghanistan. The common people were disaffected by the proteges and stooges of foreign occupiers who had carved Afghanistan into fiefdoms. Most or all of them were driven out by the Taliban and Pakistan and the remainder were on the verge of collapse or on the run.… US forces brought the warlords back, arming, financing and guiding them back to their lost thrones.” [Jane’s Terrorism and Security Monitor, 2/24/2003] Journalist Kathy Gannon will later write, “At the heart of these misguided machinations was Zalmay Khalilzad, the US president’s hand-picked envoy to Afghanistan, who choreographed the early US decisions” in the country. [Gannon, 2005, pp. 113]
November 25, 2001: US Troops Arrive in Kandahar Amid Talk of a Secret Deal
US troops are set to land near the Taliban stronghold of Kandahar, Afghanistan (see November 26, 2001). [Associated Press, 8/19/2002] Apparently, as the noose tightens around Kandahar, Hamid Karzai, the new leader of Afghanistan, makes a deal with the Taliban. He gives them a general amnesty in return for surrender of the city. Taliban’s leader Mullah Omar is allowed to escape “with dignity” as part of the deal. However, the US says it will not abide by the deal and Karzai then says he will not let Omar go free after all. Taliban forces begin surrendering on December 7. [Sydney Morning Herald, 12/8/2001] Omar escapes.
December 2001: CIA Unable to Question Pakistani Nuclear Scientists Linked to Pro-Al-Qaeda Charity Front
After CIA Director George Tenet visits Pakistan and pressures the Pakistani government to take stronger action against the charity front Ummah Tameer-e-Nau (UTN) (see Early October-December 2001), the CIA learns more about the organization. The CIA was previously aware that the two prominent nuclear scientists who co-founded UTN, Sultan Bashiruddin Mahmood and Chaudiri Abdul Majeed, had met with Osama bin Laden and Ayman al-Zawahiri, and advised them on how to make a nuclear weapon (see Mid-August 2001). However, the CIA discovers that other nuclear scientists are also connected to UTN, including Mirza Yusef Beg, a former member of the Pakistan Atomic Energy Commission (PAEC), and Humayun Niaz, also formerly with the PAEC. At least two senior Pakistani military officers are also connected to UTN. All these men are brought in and questioned by US officials. But the CIA is unable to question two others connected to UTN, Muhammad Ali Mukhtar, a nuclear physicist who worked for the PAEC as a weapons expert, and Suleiman Asad, who worked at A. Q. Khan’s Kahuta Research Laboratories (KRL) in its weapons design division. The CIA reasons that these two scientists would be the type of nuclear bomb makers bin Laden was most interested in. However, the Pakistani government claims that the two are in Burma working on a top secret project and cannot be brought back to Pakistan for questioning. [Levy and Scott-Clark, 2007, pp. 320-321] Shortly after 9/11, Pakistani President Pervez Musharraf called one of the leaders of Burma and asked if the two scientists could be given asylum there. [New York Times, 12/9/2001] The CIA is also interested in talking to Hamid Gul, a former ISI director and UTN’s honorary patron, but Pakistan will not allow him to be questioned either, even though he had met with Mahmood in Afghanistan around the time Mahmood met with bin Laden and al-Zawahiri. As a result, the CIA is unable to learn just how much UTN could have assisted al-Qaeda with weapons of mass destruction. [Levy and Scott-Clark, 2007, pp. 320-321]
December 2001-Early January 2002: ISI Said to Help Bin Laden and Taliban Escape and Resettle in Pakistan
Yunus Qanooni, the interior minister of Afghanistan’s new government, accuses elements of Pakistan’s ISI of helping bin Laden and Mullah Omar escape from Afghanistan to Pakistan. He further asserts that the ISI are still “probably protecting” both bin Laden and Mullah Omar and “concealing their movements and sheltering leaders of Taliban and al-Qaeda.” [BBC, 12/30/2001; New York Times, 2/13/2002] In addition, New Yorker magazine will report in early 2002, “Some CIA analysts believe that bin Laden eluded American capture inside Afghanistan with help from elements of the [ISI].” [New Yorker, 1/21/2002] Another report suggests that Hamid Gul, former director of the ISI, is behind moves to help the Taliban establish a base in remote parts of Pakistan just across the Afghanistan border. Gul was head of the ISI from 1987 to 1989, but has remained close to Afghan groups in subsequent years and has been nicknamed the “godfather of the Taliban.” One report will later suggest that he was one of the masterminds of the 9/11 plot (see July 22, 2004). The US is said to be interested in interrogating Gul, but “because of his high profile and the ripples it would cause in the Pakistan army, this is unlikely to happen…” Yet, at the same time that the ISI is reportedly helping al-Qaeda and the Taliban escape, the Pakistan army is deployed to the Afghanistan border in large numbers to prevent them from escaping. [Asia Times, 12/13/2001] In November 2001, it was reported that the US was continuing to rely on the ISI for intelligence about Afghanistan, a move none other than Gul publicly derided as “foolish.”(see November 3, 2001).
January 6, 2002: Mullah Omar Escapes Capture by US Military
The US allegedly locates former Taliban leader Mullah Omar and 1,500 of his soldiers in the remote village of Baghran, Afghanistan. After a six-day siege, and surrounded by US helicopters and troops, Omar and four bodyguards supposedly escape the dragnet in a daring chase on motorcycles over dirt roads. His soldiers are set free in return for giving up their weapons, in a deal brokered by local leaders. Yet it remains unclear if Omar was ever in the village in the first place. [Observer, 1/6/2002]
January 8, 2002: Intensive Search for Bin Laden and Mullah Omar in Afghanistan Comes to a Halt
Military spokesperson Navy Rear Adm. John Stufflebeem says, “We’re going to stop chasing… the shadows of where we thought [bin Laden and Mullah Omar were] and focus more on the entire picture of the country, where these pockets of resistance are, what do the anti-Taliban forces need, so that we can develop a better intelligence picture. The job is not complete and those leaders whom we wish to have from the al-Qaeda and Taliban chain of command, we are casting a wide net—a worldwide net, as well as regional, for where they are.” This announcement comes just two days after reports that Mullah Omar escaped an encirclement near Kandahar and fled into the nearby hills (see January 6, 2002). [Reuters, 1/8/2002]
February 25, 2002: Taliban Defector Aware of ISI-Al-Qaeda Links Is Ignored by CIA
Time magazine reports the CIA is still not interested in talking to Mullah Mohammed Khaksar, easily the highest ranking Taliban defector. Khaksar was the Taliban’s deputy interior minister, which put him in charge of vital security matters. He was secretly giving the Northern Alliance intelligence on the Taliban since 1997, and he had sporadic and mostly unsuccessful efforts trying to give information to the US while he still worked for the Taliban (see April 1999 and Between September 12 and Late November 2001). In late November 2001, he defected to the Northern Alliance and was given an amnesty due to his secret collaboration with them. He continues to live in his house in Kabul after the defeat of the Taliban, but is unable to get in contact with US intelligence. In February 2002, Time magazine informs US officials that Khaksar wants to talk, but two weeks later the magazine will report that he still has not been properly interviewed. [Time, 2/25/2002] The US may be reluctant to speak to him because much of what he has to say seems to be about al-Qaeda’s links with the Pakistani ISI, and the US is now closely working with Pakistan. Time magazine reports, “The little that Khaksar has divulged to an American general and his intelligence aide—is tantalizing.… He says that the ISI agents are still mixed up with the Taliban and al-Qaeda,” and that the three groups have formed a new political group to get the US out of Afghanistan. He also says that “the ISI recently assassinated an Afghan in the Paktika province who knew the full extent of ISI’s collaboration with al-Qaeda.” [Time, 2/19/2002] He will similarly comment to journalist Kathy Gannon that bin Laden’s foreign fighters in Afghanistan “were all protected by the Taliban leadership, but their money and instructions came direction from Pakistan’s ISI.” [Gannon, 2005, pp. 161] Khaksar will continue to live in Afghanistan until early 2006, when he is apparently assassinated by the Taliban. [Washington Post, 1/15/2006]
June 22, 2002: Al-Qaeda Spokesperson Says Bin Laden and Other Top Leaders Are Still Alive
Al-Qaeda spokesperson Suliman Abu Ghaith allegedly claims that al-Qaeda leaders Osama bin Laden and Ayman al-Zawahiri, plus Taliban leader Mullah Omar, are alive and well. “I want to assure Muslims that Sheik Osama bin Laden… is in good and prosperous health and all what is being rumored about his illness and injury in Tora Bora has no truth,” he says. He adds that al-Qaeda is ready to attack new targets, and says it is responsible for a recent bombing of a synagogue in Djerba, Tunisia (see April 11, 2002). Although he does not explicitly say al-Qaeda was behind the 9/11 attacks, he calls the attacks a “great historic victory that broke the backs of the Americans, the strongest power in this world.” The comments are made in an audiotape played on Al Jazeera. The authenticity of the recording has not been independently confirmed, and Al Jazeera does not explain how it got the recording or when it was made. [Associated Press, 6/22/2002] Abu Ghaith previously issued video recordings of his statements (see October 10, 2001).
July 2002: US Special Forces Not Given Permission to Target Mullah Omar
A CIA case officer tells Adam Rice, a US Special Forces operations sergeant working out of a safe house near Kandahar, Afghanistan, that a figure believed to be top Taliban leader Mullah Omar has been tracked by a Predator drone to a location in Shah-i-Kot Valley, a short flight away. Omar and the group with him would be vulnerable to a helicopter assault. However, whenever Rice’s team wants to move more than five kilometers from their safe house, they are required to file a request in advance. If fighting is involved, the request has to pass through several layers of bureaucracy, and a three-star general has to give the final okay. The process can take days, and in this case it does. The target eventually moves on before permission is given. [Newsweek, 8/28/2007]
Autumn 2002: Taliban and Al-Qaeda Regrouping in Afghanistan
With the US having diverted much of their best troops and equipment to Iraq, the Taliban and al-Qaeda begin regrouping inside Afghanistan. In August 2002, it is reported that former Taliban head Mullah Omar has secretly returned to Afghanistan and is living in remote hideouts near Kandahar. [Guardian, 8/30/2002] In September, US intelligence officials say “al-Qaeda operatives who found refuge in Pakistan are starting to regroup and move back into Afghanistan… The movement back into Afghanistan is still relatively small and involves al-Qaeda members traveling in small groups, the officials say.… American officials say the world’s largest concentrations of al-Qaeda operatives are now in Afghanistan and Pakistan, and the recent influx into Afghanistan is creating new dangers.” [New York Times, 9/10/2002] In December, a United Nations report claims that al-Qaeda training camps have recently been reactivated in Afghanistan, and new volunteers are making their way to the camps. While the new camps are basic, they are said to be “increasing the long-term capabilities of the al-Qaeda network.” [Associated Press, 12/17/2002]
