In 1991, there is a surge in the number of US soldiers adhering to Islam, due to a conversion program sponsored by the Saudi government (see March-September 1991). Islamic activist Abdurahman Alamoudi approaches the US military and suggests they create a program for Muslim chaplains, similar to a longstanding program for Christian chaplains. His proposal is accepted and in 1991 he creates the American Muslim Armed Forces and Veterans Affairs Council (AMAFVAC) with the stated purpose to “certify Muslim chaplains hired by the military.” In 1993, the Defense Department certifies it as one of two organizations to select and endorse Muslim chaplains. The other is the Graduate School of Islamic and Social Sciences (GSISS). [US Congress, Senate, Committee on the Judiciary, 10/14/2003; Wall Street Journal, 12/3/2003] That group is run by prominent Islamic scholar Taha Jabir Al-Alwani. Most of the roughly one dozen Muslim chaplains in the US military are educated there. In 2002, the US government searches the school and Al-Alwani’s home as part of a raid on the SAAR network (see March 20, 2002). He appears to also be named as an unindicted coconspirator in the Sami al-Arian trial. Counterterrorism expert Rita Katz says Al-Alwani is a “person who supports and funnels money to terrorist organizations,” but Al-Alwani denies all terrorism ties and has not been charged with any crime. [St. Petersburg Times, 3/27/2003] Most Muslim chaplains trained at GSISS then receive an official endorsement from Alamoudi’s AMAFVAC organization. US intelligence will learn in early 1994 that Alamoudi has ties to bin Laden (see Shortly After March 1994). [US Congress, Senate, Committee on the Judiciary, 10/14/2003] In 1996, counterterrorism expert Steven Emerson will warn in a Wall Street Journal editorial that Alamoudi openly supports Hamas, even after the US government officially designated it a terrorist organization (see March 13, 1996). [Wall Street Journal, 3/13/1996] But Alamoudi will work for the Defense Department until 1998 on an unpaid basis to nominate and to vet Muslim chaplain candidates. After that, he will give the task to others in his AMAFVAC organization. [US Congress, Senate, Committee on the Judiciary, 10/14/2003] Furthermore, Senator Charles Schumer (D-NY) will later allege the US the military allowed Muslim chaplains to travel to the Middle East on funds provided by the Muslim World League, which has been linked to al-Qaeda (see October 12, 2001). Senator Jon Kyl (R-AZ) will later comment, “It is remarkable that people who have known connections to terrorism are the only people to approve these chaplains.” [US News and World Report, 10/27/2003] In late 2003, Alamoudi will be arrested and later sentenced to 23 years in prison for terrorism-related crimes. The US military will announce around the same time that it is reviewing and overhauling its Muslim chaplain program. [US News and World Report, 10/27/2003]
April 1993-Mid-2003: FBI Slow to Act as Main Branch of Al-Qaeda’s ‘Operational Headquarters’ in US Reforms in Boston
The Al-Kifah Refugee Center is bin Laden’s largest fundraising group in the US and has offices in many cities (see 1986-1993 and 1985-1989). Counterterrorism expert Steven Emerson will later call it “al-Qaeda’s operational headquarters in the United States.” [Emerson, 2006, pp. 436] In late March 1993, Newsweek will report that “virtually every principal figure implicated in the World Trade Center bombing” that took place the month before (see February 26, 1993) has a connection to the Al-Kifah branch in Brooklyn, New York. [Newsweek, 3/29/1993] The Brooklyn branch quietly shuts itself down. But other branches stay open (see Shortly After February 26, 1993-1994) and the Boston branch appears to take over for the Brooklyn branch. In April 1993, it reincorporates under the new name Care International (which is not connected with a large US charity based in Atlanta with the same name). Emerson will later comment, “The continuity between the two organizations was obvious to anyone who scratched the surface.” For instance, Care takes over the publication of Al-Kifah’s pro-jihad newsletter, Al Hussam. [Emerson, 2006, pp. 437] It also shares the same website and street address as the Al-Kifah Boston branch it took over. [Wall Street Journal, 11/21/2001] By the time of the WTC bombing, Al-Kifah is doing most of its fund raising for the mujaheddin fighting in Bosnia. For instance, one month after the bombing, a member of Al-Kifah/Care in Boston named Aafia Siddiqui sends Muslims newsgroups an e-mail pledge form asking for support for Bosnian widows and orphans. Siddiqui, a university student in Boston for most of the 1990s, is well known to Boston’s Muslim community as a dedicated Islamic activist. One imam will later recall, “She attended many conferences. Whenever there was an event, she would come.” But it appears Siddiqui is also a prominent al-Qaeda operative, working as a “fixer” for Khalid Shaikh Mohammed. Despite considerable suspicious evidence against her discovered shortly after 9/11, she will disappear in Pakistan in 2003 (see Late September 2001-March 2003). [Vanity Fair, 3/2005] Two long-time Care employees are also be long-time employees of Ptech, a Boston-based computer firm formed in 1994 that will be raided in 2002 by the FBI for suspected radical militant ties. One of them writes many articles advocating Islamic jihad (see 1994). Emerson and his Investigative Project on Terrorism research team begins researching Care International in 1993, targeting it and several employees for suspected radical militant ties. The team discovers some checks made out to Care have notations on the back such as, “For jihad only.” [Telegram and Gazette, 9/11/2006] Presumably Emerson’s team shares what they learn with US intelligence, as his research on other matters lead to US government investigations around the same time (see for instance October 1994-2001). Al-Kifah branches in the US are connected to the charity Maktab al-Khidamat (MAK) overseas, which is also sometimes called Al-Kifah. In 1996, a secret CIA report will assert that the main MAK office in Pakistan funds at least nine militant training camps in Afghanistan and has ties to bin Laden and other militant groups and leaders. Furthermore, it connects this office to the Al-Kifah office in Brooklyn and the 1993 WTC bomber Ramzi Yousef (see January 1996). But the FBI takes no action against any of the remaining Al-Kifah branches in the US before 9/11. The US will officially declare Al-Kifah and/or Maktab al-Khidamat a terrorist financier shortly after 9/11, but by then all the US branches have closed or changed their names (see September 24, 2001). One day after the declaration, a Boston Globe article will make the connection between Care and Al-Kifah, pointing out that Care and the old Al-Kifah branch in Boston share the exact same address. [Boston Globe, 9/26/2001] But the FBI will wait until 2003 before raiding the Care offices and shutting it down. The FBI will later state that Care raised about $1.7 million from 1993 to 2003. [Telegram and Gazette, 9/11/2006] Al-Kifah has had a murky connection with the CIA, at least in its early days. Shortly after 9/11, Newsweek will comment that Al-Kifah’s Brooklyn office “doubled as a recruiting post for the CIA seeking to steer fresh troops to the mujahedin.” [Newsweek, 10/1/2001]
October 1994-2001: Media Reports Point to Links Between Hamas and Texas Charities
In October 1994, CBS News shows a documentary made by counterterrorism expert Steven Emerson called Jihad in America that alleges the Islamic Association for Palestine (IAP) and Holy Land Foundation have given critical financial support to Hamas. The story is largely based on confessions that Hamas operative Mohammad Salah and another man gave to Israeli officials in 1993 (see January 1993). It claims that these two Texas-based organizations are sending more than a million dollars to Hamas, much of it to buy ammunition. The US officially declares Hamas a terrorist organization in 1995 (see January 1995), and a new law passed in 1996 confirms a 1995 executive order that giving any support to groups like Hamas a crime (see April 25, 1996). [Dallas Morning News, 10/5/1994; Dallas Morning News, 4/8/1996] In March 1996, the Israeli government closes the Jerusalem office of the Holy Land Foundation because of alleged ties to Hamas. This prompts Steve McGonigle, a reporter at the Dallas Morning News, to begin investigating Holy Land, since their headquarters are near Dallas. Beginning in April 1996, McGonigle begins reporting on Holy Land and their ties to Hamas. He notices by looking at public records that Mousa Abu Marzouk, the political leader of Hamas being detained in New York (see July 5, 1995-May 1997), has provided hundreds of thousands of dollars in funding to Holy Land beginning in 1992, the same information that FBI agents like Robert Wright are already aware of. In 1997, the Associated Press will note that Marzouk gave Holy Land its single biggest contribution in the first five years of Holy Land’s existence. Members of Congress such as US Representative Nita Lowey (D-NY) ask the IRS to revoke the Holy Land Foundation’s tax-exempt status because of its support for a US-designated terrorist group. McGonigle also publishes that Marzouk’s wife invested $250,000 in 1993 in InfoCom, the computer company located next to Holy Land that will also be accused of Hamas ties (see September 16, 1998-September 5, 2001). McGonigle will continue to write more stories about Holy Land and Hamas, causing Holy Land to sue his newspaper for defamation in April 2000 (the suit will be dropped after 9/11). [Dallas Morning News, 4/8/1996; Associated Press, 5/26/1997; Columbia Journalism Review, 1/2002] Yet despite all of this media coverage, InfoCom will not be raided until one week before 9/11 (see September 5-8, 2001), and the Holy Land Foundation will not be raided until after 9/11.
December 16, 1994-May 1995: Osama’s Brother-in-Law Khalifa Is Arrested in US
Mohammed Jamal Khalifa, a brother-in-law to bin Laden, is arrested in the US. He is held for visa fraud, but he is believed to be a major terrorist. His arrest takes place at a Holiday Inn in Morgan Hill, California. [San Francisco Chronicle, 10/24/2001] That is only about 20 miles from Santa Clara, where double agent Ali Mohamed is running an al-Qaeda cell (see 1987-1998). Counterterrorism expert Steven Emerson will later say of Khalifa and Mohamed, “It seems to me that they were probably in contact. I’m basing that only intuitively on the fact that they were in the same area, they were close to bin Laden, and they would’ve had an incentive to stay together.” [Lance, 2006, pp. 167] According to one account, Khalifa is arrested on behalf of the government of Jordan, because he is on trial there. [San Francisco Chronicle, 10/24/2001] Another account claims that Philippine authorities “tipped off Federal authorities on Khalifa’s movements.” [Filipino Reporter, 4/27/1995] He is traveling on a Saudi passport. He’d flown into the US from London on December 1 and has papers indicating he would be heading back to the Philippines. [Lance, 2006, pp. 158-159] It has been claimed that the CIA helped him get his US visa (see December 1, 1994). There are many reasons for US authorities to suspect Khalifa is a major terrorist figure: 
He is arrested with Mohammed Loay Bayazid, one of the dozen or so original members of al-Qaeda. Bayazid had attempted to purchase nuclear material for bin Laden the year before (see December 16, 1994). Philippine investigators had recently completed a secret report on terrorist funding. The report focuses on Khalifa, and says his activities in the Philippines strongly link with Muslim extremist movements in Iraq, Jordan, Turkey, Russia, Malaysia, the United Arab Emirates, Romania, Lebanon, Syria, Pakistan, Albania, the Netherlands, and Morocco. It calls a charity which Khalifa runs a “pipeline through which funding for the local extremists is being coursed.” Perhaps not coincidentally, the report was released just one day before Khalifa’s arrest in the US (see December 15, 1994). His possessions, which are quickly examined and translated, include a handwritten manual in Arabic detailing how to set up a terrorist curriculum at a school in the Philippines, giving lessons in bomb-making and assassination. [San Francisco Chronicle, 10/24/2001] Khalifa’s business card was discovered in a search of the New York City residence of Sheikh Omar Abdul-Rahman in 1993 (see August 1993). He is an unindicted coconspirator in the “Landmarks” bombings plot, which would have killed thousands in New York City. The trial is getting underway at this time. Abdul-Rahman will be convicted and sentenced to over 300 years in prison (see June 24, 1993). A State Department cable from days after his arrest states Khalifa is a “known financier of terrorist operations and an officer of an Islamic NGO in the Philippines that is a known Hamas front.” An alias is found in his personal organizer that was also used in a bomb-making manual brought into the US by Ahmad Ajaj, Ramzi Yousef’s travel partner, when the two of them came to the US to implement the 1993 World Trade Center bombing (see September 1, 1992). Bojinka plotter Wali Khan Amin Shah’s phone number is found in Khalifa’s possessions. The Bojinka plot, if successful, also would have killed thousands (see January 6, 1995). [Lance, 2006, pp. 158-159] A number in Pakistan that Ramzi Yousef had used to call the Philippines is found as well. Author Peter Lance will later note that such numbers “should have led the FBI directly to Ramzi Yousef, the world’s most wanted man” at the time. [Lance, 2006, pp. 160]
However, despite this wealth of highly incriminating material, within weeks of his arrest the US will decide to deport him to Jordan (see January 5, 1995). Over the next four months, even more of his links to terrorist activity will be discovered (see Late December 1994-April 1995). But Khalifa will be deported anyway (see April 26-May 3, 1995), and then soon freed in Jordan (see July 19, 1995).
March 13, 1996: Clinton Administration Criticized for Meetings with Radical Muslim Activist
Counterterrorism expert Steven Emerson, head of the Investigative Project on Terrorism, criticizes the Clinton administration for its ties to Abdulrahman Alamoudi in a Wall Street Journal editorial. Alamoudi is a prominent Muslim activist and heads an organization called the American Muslim Council (AMC). Emerson notes that on November 9, 1995, President Clinton and Vice President Al Gore met with Alamoudi as part of a meeting with 23 Muslim and Arab leaders. And on December 8, 1995, National Security Adviser Anthony Lake, met with Alamoudi at the White House along with several other American Islamic leaders. Emerson notes that Alamoudi openly supports Hamas, even though the US government officially designated it a terrorist financier in early 1995 (see January 1995), and he has been the primary public defender of high ranking Hamas leader Mousa Abu Marzouk, who the US declared a terrorism financier and then imprisoned in 1995 (see July 5, 1995-May 1997). He notes that Alamoudi’s AMC also has close ties to other Islamist groups such as the Muslim Brotherhood, and in 1994 the AMC co-sponsored a trip to the US for Sudanese leader Hasan al-Turabi, a well-known radical militant who is hosting Osama bin Laden in Sudan at the time. Emerson concludes, “The president is right to invite Muslim groups to the White House. But by inviting the extremist element of the American Muslim community—represented by the AMC—the administration undercuts moderate Muslims and strengthens the groups committing terrorist attacks.” [Wall Street Journal, 3/13/1996] It will later be reported that in 1994, US intelligence discovered that the AMC helped pass money from bin Laden to Sheikh Omar Abdul-Rahman, but it is not known if Clinton was aware of this (see Shortly After March 1994). But Alamoudi’s political influence in the US will not diminish and he will later be courted by future President Bush (see July 2000). He will eventually be sentenced to a long prison term for illegal dealings with Libya (see October 15, 2004).
December 14-25, 1999: Private Investigators Discover Al-Qaeda Sleeper Cell in California
Counterterrorism “tsar” Richard Clarke, hearing about Ahmed Ressam’s arrest earlier in the day (see December 14, 1999), hires a team of private terrorism analysts to complete a report on militant Islamic cells in North America. The Investigative Project on Terrorism, led by Steven Emerson, finishes the report just prior to the end of the year, hoping to help stop any millennium plots. [New Yorker, 5/29/2006] Investigator Rita Katz discovers that a man named Khalil Deek who has just been arrested in Jordan for a role in a millennium plot is a US citizen (see December 11, 1999). Using only public records, she begins looking into Deek’s activities in the US. She believes that she discovers a sleeper cell consisting of: [Katz, 2003, pp. 161-162] Khalil Deek. He is an al-Qaeda operative who has lived in Anaheim, California, for most of the 1990s. A former senior CIA official will later claim that Deek’s extremist connections were already “well established in the classified intelligence” by this time, and in fact, it will later be reported that Deek’s connections with al-Qaeda leader Abu Zubaida had been investigated since the late 1980s (see Late 1980s). Katz learns from intelligence reports that Deek has connections to a militant cell based in Montreal, Canada that includes Ressam. She suspects that Deek is coordinating al-Qaeda groups in North America. [LA Weekly, 9/15/2005; New Yorker, 1/22/2007] Deek regularly wires tens of thousands of dollars to overseas destinations. Business records show Deek was still in Anaheim as late as August 1998. The research team discovers Deek may have been visiting the US as late as September 1999. [US Congress, 1/25/2000; Orange County Weekly, 6/15/2006] Hisham Diab. Katz learns that Diab is Deek’s next door neighbor in Anaheim and she suspects the two of them have been operating a sleeper cell there (in fact, Diab’s wife had already repeatedly tried to warn the FBI about her husband, to no avail (see March 1993-1996). [LA Weekly, 9/15/2005] She discovers that Deek and Diab have formed a charity front called Charity Without Borders (this group received a $75,000 state grant in 1997 to distribute fliers encouraging the recycling of used motor oil). [LA Weekly, 9/15/2005; Orange County Weekly, 6/15/2006] Tawfiq Deek, Khalil Deek’s brother. Katz discovers that Tawfiq has presented himself as the Islamic Association for Palestine (IAP) spokesman in California. Katz calls the IAP the “Hamas front in America.” [Katz, 2003, pp. 167] Khalid Ashour, a Palestinian. He had lived in the same apartment building as the Deek brothers and Diab, and also worked with the IAP. But what most interests Katz is that he had been heavily involved in the Islamic Center of Tuscon in the early 1990s. The Islamic Center is important for the IAP but is also believed to be the focal point for al-Qaeda’s first base in the US (see 1994). Katz discovers that he had been arrested in 1991 trying to enter the US with a fake ID and border guards found handbooks of explosives and bombs in his car. In 1999, he had moved nearly half a million dollars out of the US despite holding a job that only paid $600 a week. [Katz, 2003, pp. 167-168] Although Katz does not discover it at the time, another associate of the Deeks and Diab in Anaheim named Adam Gadahn will later emerge as a prominent al-Qaeda spokesman in Afghanistan (see Spring 2004).
Katz, Emerson, and other members of the Investigative Project on Terrorism will brief members of the National Security Council about what they learned on December 25, 1999, but no action will be taken against the suspects they have uncovered (see December 25, 1999).
December 25, 1999: US Intelligence Learns of Al-Qaeda Sleeper Cell in California but Fails to Take Action
US intelligence learns about a likely al-Qaeda cell in California but fails to act on it. In early December 1999, US intelligence learned that a participant in an attempted al-Qaeda linked millennium plot in Jordan was a US citizen by the name of Khalil Deek. President Clinton was immediately notified because of the implication that al-Qaeda had a presence inside the US (see December 9, 1999). The FBI began interviewing Deek’s neighbors in Anaheim, California, but apparently learned little. However Counterterrorism “tsar” Richard Clarke tasked the Investigative Project on Terrorism, a private research team, to look into Deek’s US ties. On this day, the team goes to the White House and gives a report on their findings to Clarke and an assistant of his known only as Peter, and others on the National Security Council (NSC). Rita Katz has been leading the research effort and gives a presentation outlining the sleeper cell they believe they have discovered in Anaheim consisting of Deek, his brother Tawfiq Deek, Khalid Ashour, Hisham Diab, and a charity front known as Charity Without Borders (see December 14-25, 1999). According to a later account by Katz, Clarke, Peter, and the others are impressed at how much the team was able to learn looking only through public records. They express surprise that the FBI was not able to learn as much. The NSC gives the information to the FBI but apparently they do nothing with it. Katz will report in 2003 that Ashour is still living in California even though his request for asylum could have been easily denied. [Katz, 2003, pp. 156-174]
May 31, 2001: Terrorism Experts Say Al-Qaeda Is Planning to Carry Out Attacks in the US
Steven Emerson and Daniel Pipes, both experts on the Middle East and Islamist terrorism, write in the Wall Street Journal that al-Qaeda is “planning new attacks on the US.” Their article is written as a response to the recent guilty verdicts in a New York court against four men accused of planning the 1998 bombings of the US embassies in Kenya and Tanzania (see 10:35-10:39 a.m., August 7, 1998). “Unfortunately,” Emerson and Pipes write, “the trial does almost nothing to enhance the safety of Americans.… Indeed, recent information shows that al-Qaeda is not only planning new attacks on the US but is also expanding its operational range to countries such as Jordan and Israel.”
Al-Qaeda Is ‘the Most Lethal Terrorist Organization Anywhere in the World’ – Emerson and Pipes also write that tens of thousands of pages from the trial transcript “provide a full and revealing picture of al-Qaeda, showing it to be the most lethal terrorist organization anywhere in the world.” The transcript shows that “al-Qaeda sees the West in general, and the US in particular, as the ultimate enemy of Islam. Inspired by their victory over the Soviet Union in Afghanistan in the 1980s, the leaders of al-Qaeda aspire to a similar victory over America, hoping ultimately to bring Islamist rule here.”
Al-Qaeda Personnel Have Been Taught ‘How to Destroy Large Buildings’ – The article states that Osama bin Laden, the leader of al-Qaeda, has “set up a tightly organized system of cells in an array of American cities, including Brooklyn, NY; Orlando, Fla.; Dallas; Santa Clara, Calif.; Columbia, Mo.; and Herndon, Va.” Furthermore, according to Emerson and Pipes, court documents show that “[o]fficials of the Iranian government helped arrange advanced weapons and explosives training for al-Qaeda personnel in Lebanon, where they learned, for example, how to destroy large buildings.”
America Must Fight Al-Qaeda ‘as We Would in a War’ – Emerson and Pipes conclude that the recent trial “shows that trials alone are not enough” when dealing with al-Qaeda. They suggest that al-Qaeda operatives “are better thought of as soldiers, not criminals.” Therefore, they write, “To fight al-Qaeda and other terrorist groups… we must fight them as we would in a war.” This would mean that, “as in a conventional war, America’s armed forces, not its policemen and lawyers, are primarily deployed to protect Americans.” Furthermore, the two men opine: “If a perpetrator is not precisely known, then those who are known to harbor terrorists will be punished. This way, governments and organizations that support terrorism will pay the price, not just the individuals who carry it out.” [Wall Street Journal, 5/31/2001]
Writers Have Been Accused of Anti-Muslim Bias – Emerson and Pipes are controversial figures. Emerson, an award-winning investigative reporter, has been called “the nation’s foremost journalistic expert on terrorism” by the New York Post. [Harvard Crimson, 10/22/1999] And White House counterterrorism chief Richard Clarke called him “sort of the Paul Revere of terrorism.” But according to Brown University’s alumni magazine, he spent the 1990s “fighting to be taken seriously, and fending off charges of racism and anti-Muslim bias.” [Brown Alumni Magazine, 11/2002] Pipes, a foreign policy analyst, and commentator on terrorism and Islam, “appears regularly in the US media, where he is regarded as an authority on the Middle East,” The Guardian will report. Arab-Americans, however, “regard him as a Muslim basher and a staunch supporter of Israel.” According to The Nation, he “labored in comparative obscurity during the 1990s, writing a series of books and articles that advanced a hard line on Arab countries… and darkly warning that Muslim Americans posed a threat to the United States.” [Guardian, 9/10/2001; Nation, 4/22/2004]
Late September 2001-March 2003: US Intelligence Fails to Catch Apparent Al-Qaeda Sleeper Agent with Ties to Saudi Embassy, KSM, and CIA Charity Front
In 1993, the Al-Kifah Refugee Center in Brooklyn, New York, disbanded after media reports revealed that it had ties to all of the 1993 WTC bombers as well as the CIA (see 1986-1993), but it quickly reappeared in Boston under the new name Care International. Counterterrorism expert Steven Emerson had warned the government of the name change since 1993 (see April 1993-Mid-2003). But apparently US investigators only start looking closely at Care International shortly after 9/11, when the FBI interviews several current and former employees. [Wall Street Journal, 11/21/2001] Around the same time, the Fleet National Bank in Boston files a “suspicious-activity report” (SARS) with the US Treasury Department about wire transfers from the Saudi Embassy in Washington to Aafia Siddiqui, a long-time member of the Al-Kifah Refugee Center and then Care International, and her husband Dr. Mohammed Amjad Khan. Fleet National Bank investigators discover that one account used by the Boston-area couple shows repeated on-line credit card purchases from stores that “specialize in high-tech military equipment and apparel.” Khan purchased body armor, night-vision goggles, and military manuals, and then sent them to Pakistan. The bank also investigates two transfers totaling $70,000 sent on the same day from the Saudi Armed Forces Account used by the Saudi Embassy at the Riggs Bank in Washington to two Saudi nationals living in Boston. One of the Saudis involved in the transfers lists the same Boston apartment number as Siddiqui’s. The bank then notices that Siddiqui regularly gives money to the Benevolence International Foundation, which will soon be shut down for al-alleged Qaeda ties. They also discover her connection to Al-Kifah. The bank then notices Siddiqui making an $8,000 international wire transfer on December 21, 2001, to Habib Bank Ltd., “a big Pakistani financial institution that has long been scrutinized by US intelligence officials monitoring terrorist money flows.” [Newsweek, 4/7/2003] In April or May 2002, the FBI questions Siddiqui and Khan for the first time and asks them about their purchases. [Boston Globe, 9/22/2006] But the two don’t seem dangerous, as Siddiqui is a neuroscientist who received a PhD and studied at MIT, while Khan is a medical doctor. Plus they have two young children and Siddiqui is pregnant. There are no reports of US intelligence tracking them or watch listing them. Their whole family moves to Pakistan on June 26, 2002, but then Siddiqui and Khan get divorced soon thereafter. Siddiqui comes back to the US briefly by herself from December 25, 2002, to January 2, 2003. On March 1, 2003, Pakistan announces that 9/11 mastermind Khalid Shaikh Mohammed (KSM) has been captured (see February 29 or March 1, 2003). Some days later, Siddiqui drives away from a family house in Pakistan and disappears. Some later media reports will claim that she is soon arrested by Pakistani agents but other reports will deny it. Reportedly, KSM quickly confesses and mentions her name as an al-Qaeda sleeper agent, working as a “fixer” for other operatives coming to the US. On March 18, the FBI puts out a worldwide alert for Siddiqui and her ex-husband Khan, but Khan has completely disappeared as well. Siddiqui will be arrested in Afghanistan in 2008 (see July 17, 2008). [Vanity Fair, 3/2005] The CIA will later report that Ali Abdul Aziz Ali (a.k.a. Ammar al-Baluchi), a nephew of KSM and a reputed financier of the 9/11 attacks, married Siddiqui not long before her disappearance. Furthermore, in 2002 he ordered Siddiqui to help get travel documents for Majid Kahn (no relation to Siddiqui’s first husband), who intended to blow up gas stations and bridges or poison reservoirs in the US. It will also be alleged that Siddiqui bought diamonds in Africa for al-Qaeda in the months before 9/11. [Boston Globe, 9/22/2006] The Saudi Embassy will later claim that the wire transfers connected to Siddiqui were for medical assistance only and the embassy had no reason to believe at the time that anyone involved had any connection to militant activity. [Newsweek, 4/7/2003] Although Siddiqui seems to have ties with two key figures in the 9/11 plot and was living in Boston the entire time some 9/11 hijackers stayed there, there are no known links between her and any of the hijackers.
