Abd al-Rahim al-Nashiri, an al-Qaeda leader involved in the attack on the USS Cole, is said to meet two associates, Ahmed al-Hada and al-Hada’s nephew Ramzi bin al-Shibh, in Yemen. [Die Zeit (Hamburg), 10/1/2002; Newsweek, 12/2/2002] Al-Hada, an operative who runs a communications hub for Osama bin Laden, has been under surveillance since 1998, at least (see August 4-25, 1998). The surveillance of al-Hada is reportedly so important that his house is monitored by spy satellites, to visually identify everyone coming and going (see Late August 1998), although it is unclear where the meeting with al-Nashiri takes place. The exact timing of this meeting and that with bin al-Shibh is not known, although bin al-Shibh stays in Yemen for about four weeks up until a month before the bombing (see August-September 2000), and then arrives in Yemen again one day before the bombing (see October 10-21, 2000). [Newsweek, 12/2/2002] Bin al-Shibh is repeatedly denied a US visa. Although the earlier applications are denied on the grounds he may stay in the US, it will later be suggested that his presumed role in the Cole bombing may have influenced one or more later denials (see May 17, 2000-May 2001).
October 12, 2000: USS Cole Bombed by Al-Qaeda
The USS Cole is bombed in the Aden, Yemen harbor by two al-Qaeda militants, Hassan al-Khamri and Ibrahim al-Thawar (a.k.a. Nibras). Seventeen US soldiers are killed and 30 are wounded. The CIA will later conclude that with just slightly more skilled execution, the attack would have killed 300 and sunk the ship. [ABC News, 10/13/2000; Coll, 2004, pp. 532; 9/11 Commission, 7/24/2004, pp. 191] The Islamic Army of Aden (IAA) immediately takes credit for the attack. This is a Yemen-based Muslim militant group widely believed to have close ties to al-Qaeda (see 1996-1997 and After). [Guardian, 10/14/2000] The IAA statement is released by its spokesman, Abu Hamza al-Masri (see Early 1997, (June 1998), and December 28, 1998 and After). Abu Hamza says that the attack was timed to mark the anniversary of the execution of the IAA’s former commander (see October 17, 1999). [O’Neill and McGrory, 2006, pp. 184] The prime minister of Yemen at the time of the bombing will say shortly after 9/11, “The Islamic Army was part of al-Qaeda.” [Guardian, 10/13/2001] The US soon learns the names of some al-Qaeda operatives involved in the attack, including Khalid Shaikh Mohammed, Tawfiq bin Attash and Fahad al-Quso (see Early December 2000), and Abd al-Rahim al-Nashiri (see November-December 2000). 9/11 hijackers Ramzi bin al-Shibh (see October 10-21, 2000) and Khalid Almihdhar (see Around October 12, 2000) may also have been involved. This is a repeat of a previously attempted attack, against the USS The Sullivans, which failed and was apparently undetected (see January 3, 2000). [Los Angeles Times, 12/22/2002] The 9/11 Commission will later say the Cole bombing “was a full-fledged al-Qaeda operation, supervised directly by bin Laden. He chose the target and location of the attack, selected the suicide operatives, and provided the money needed to purchase explosives and equipment.” [9/11 Commission, 7/24/2004, pp. 190]
Shortly After October 12, 2000: Mastermind of USSColeBombing Protected by Yemeni Government
In 2008, the Washington Post will report that shortly after the October 12, 2000 bombing of the USS Cole, US and Yemeni investigators are able to determine that the mastermind of the bombing was al-Qaeda leader Abd al-Rahim al-Nashiri (see November-December 2000). Yemeni authorities insisted that Nashiri had fled the country before the Cole bombing. But an anonymous senior Yemeni official will tell the Post that in fact al-Nashiri was still in the country and Yemeni investigators had located him in a town about 90 miles northwest of the Aden, where the bombing took place. Al-Nashiri spends several months in this town while receiving high-level protection from the government. “We knew where he was, but we could not arrest him,” this official will say. [Washington Post, 5/4/2008] It has separately been reported that several months before the bombing, al-Nashiri was given safe passage through Yemen without needing to be searched, at the orders Yemeni interior Minister Hussein Arab (see April 2000).
November-December 2000: Key Suspect in Cole Bombing Identified
After several weeks of investigation, US authorities learn that al-Qaeda leader Abd al-Rahim al-Nashiri was involved in the plot to attack the USS Cole. Investigators find a second safe house used by the bombing team, and learn it was registered to al-Nashiri under a name variant. Al-Nashiri’s name is dimly familiar to FBI agent Ali Soufan, who remembers that a source said al-Nashiri was planning a seaborne attack against a US vessel in Aden (see After August 7, 1998). The FBI then finds that al-Nashiri rented a car in Aden before the bombing. Author Lawrence Wright will comment, “It was another strong link between al-Qaeda and the Cole attack.” [New Yorker, 7/10/2006 
] In addition, one of the bombers detained by Yemeni authorities, Jamal al-Badawi, identifies al-Nashiri as a person who gave instructions for the attack. Al-Badawi also says he thought al-Nashiri was working for bin Laden, but al-Nashiri did not tell al-Badawi this directly. [CNN, 12/13/2000] Although al-Nashiri was the operational manager, he was actually in Afghanistan for a meeting with Osama bin Laden when the opportunity to attack arose and was not physically present at the bombing. Investigators are aware that he is the cousin of one of the bombers of the US embassy in Nairobi, which he facilitated, and a captured embassy bomber identified a photo of him for the FBI two years earlier (see 10:35-10:39 a.m., August 7, 1998 and August 22-25 1998). Al-Nashiri has been known to various intelligence agencies since 1998, at least, and was monitored at the Malaysia summit of top al-Qaeda leaders at the start of the year (see January 5-8, 2000). [CNN, 12/11/2000; 9/11 Commission, 7/24/2004, pp. 152-3; Wright, 2006, pp. 318] US investigators also identify another leading suspect in the case, Khallad bin Attash, at around the same time (see January 4, 2001).
June 2001: CIA Hears Key Al-Qaeda Operatives Are Disappearing, Preparing for Suicide Attack
In June 2001, the CIA learns that key al-Qaeda operatives are disappearing, while others are preparing for martyrdom. [US Congress, 9/18/2002] CIA Director George Tenet will later elaborate in a 2007 book that during the month of June, the CIA learns: 
Several training camps in Afghanistan are closing, a sign that al-Qaeda is anticipating a retaliatory strike. Bin Laden is leaving Afghanistan in fear of a US strike (this later turns out to be erroneous). Al-Qaeda operatives are leaving Saudi Arabia and returning to Afghanistan, which fits a pattern of movement just before attacks. Ayman al-Zawahiri is warning associates in Yemen to flee in anticipation of a crackdown. Abd al-Rahim al-Nashiri, one of the masterminds of the USS ‘Cole’ bombing, has disappeared. Other important operatives are disappearing or preparing for martyrdom. A key Afghan training camp commander was reportedly weeping for joy because he believed he could see his trainees in heaven. [Tenet, 2007, pp. 148-149] The CIA also heard in May that operatives are disappearing and preparing for martyrdom (see May 2001).
June 28, 2001: CIA Leaders Told Bin Laden Will Launch Spectacular Attack against US and/or Israeli Targets within Weeks
CIA official Richard Blee gives a briefing on the state of the terrorism threat to CIA Director George Tenet and Counterterrorist Center Director Cofer Black. According to an account by Tenet in his 2007 book, Blee identifies more than 10 specific pieces of intelligence about impending attacks. Tenet claims that experienced analysts call this intelligence “both unprecedented and virtually 100 percent reliable.” Blee specifically mentions: A key Afghanistan training camp commander was seen weeping with joy because he believed he could see his trainees in heaven, implying a successful suicide attack to come. For the last three to five months, al-Qaeda’s number two leader, Ayman al-Zawahiri, is believed to have been involved in an unprecedented effort to prepare terrorist operations. Abd al-Rahim al-Nashiri, one of the USS Cole bombing masterminds, has disappeared. [Tenet, 2007, pp. 149] Leaders of the Cole bombing are believed to be planning new attacks against the US. [Tenet, 2007, pp. 147] Other important operatives around the world are disappearing or preparing for martyrdom. [Tenet, 2007, pp. 149]
Blee concludes by saying: “Based on a review of all source reporting over the last five months, we believe that [Osama bin Laden] will launch a significant terrorist attack against US and/or Israeli interests in the coming weeks. The attack will be spectacular and designed to inflict mass casualties against US facilities or interests. Attack preparations have been made. Attack will occur with little or no warning.” [US Congress, 7/24/2003, pp. 322; Tenet, 2007, pp. 149] This warning, including the concluding quote, is shared with “senior Bush administration officials” in early July. [US Congress, 9/18/2002]
March 28, 2002-Mid-2004: High-Ranking Al-Qaeda Detainees Subjected to Aggressive Interrogation Techniques
In 2007, NBC News will report that the CIA uses aggressive interrogation techniques on at least 13 high-ranking al-Qaeda detainees between 2002 and 2004. These techniques are first used on Abu Zubaida, captured in March 2002 (see March 28, 2002), and some of the techniques are discontinued in the wake of the Abu Ghraib scandal around the middle of 2004 (see April 28, 2004), which is also around the time the CIA’s Inspector General issues a secret report suggesting many of these techniques could be a violation of an international treaty against torture (see May 7, 2004). Euphemistically called “enhanced interrogation,” these techniques include: Sleep deprivation. Exposure to extreme heat and cold. Confined quarters. Psychological and physical abuse. The use of psychotropic drugs. Waterboarding. However, waterboarding is allegedly only used on about four of the detainees (see May 2002-2003).
All 13 of these detainees will later be transferred to Guantanamo prison to stand trial before a military tribunal there (see September 2-3, 2006). (Two others similarly transferred – Abu Faraj al-Libbi and Abd al-Hadi al-Iraqi – are captured after the Abu Ghraib scandal and thus are not subjected to as many interrogation techniques.) [MSNBC, 9/13/2007] However, there are other “ghost detainees” not officially acknowledged as captured by the US government (see June 7, 2007). Some, like Hassan Ghul, Abdul Rahim al-Sharqawi, and Mohammed Omar Abdul-Rahman, are held in the same secret prison as most of the “official” high-ranking detainees later transferred to Guantanamo, so it would seem likely that aggressive techniques have been used on many of them as well. In 2007, President Bush will sign an executive order allowing the CIA to use most of these aggressive techniques again (see July 2007).
Spring-Late 2002: CIA Videotapes Interrogations of High Value Detainees
The CIA videotapes interrogations of high-value al-Qaeda detainees. The interrogations of at least two detainees are taped. One of the detainees is Abu Zubaida, who helped run a training camp in Afghanistan (see March 28, 2002 and Mid-May 2002 and After). [Central Intelligence Agency, 12/6/2007] Another is Abd al-Rahim al-Nashiri, chief of al-Qaeda operations in the Arabian peninsula (see Early October 2002 and (November 2002)). [New York Times, 12/8/2007] The tapes run to a “couple hundred hours,” and mostly show 24 hour a day coverage of Zubaida in his cell. However, some portions show aggressive interrogations, including waterboarding. According to one source, full transcripts are not made, although summaries are drafted and sent back to CIA headquarters. [Fox News, 12/13/2007; Washington Post, 12/18/2007] Another source says the opposite, “A detailed written transcript of the tapes’ contents—apparently including references to interrogation techniques—was subsequently made by the CIA.” [Newsweek, 12/11/2007] However, after tapes of Zubaida and al-Nashiri’s interrogations are destroyed in 2005 (see November 2005), some tapes are still in existence (see September 19 and October 18, 2007), suggesting that either not all tapes of their interrogations are destroyed, or that one or more other detainees are videotaped. Another detainee whose interrogations may be taped is Ramzi bin al-Shibh, because he is the most important remaining al-Qaeda leader who is captured during this time period (see June 13-September 25, 2000 and September 11, 2002). In addition, at least one audio recording is also made. [US District Court for the Eastern District of Virginia, Alexandria Division, 10/25/2007 ] According to a statement by CIA Director Michael Hayden, the interrogations are recorded because “new” procedures are used during the interrogations and the tapes are “meant chiefly as an additional, internal check on the program in its early stages.” The videotaping apparently ends in 2002. [Central Intelligence Agency, 12/6/2007] Another reason for the videotaping is said to be Abu Zubaida’s poor medical condition – he was shot several times during the operation to capture him. An intelligence official will later say, “There were concerns that there be a record of his medical treatment and condition in the event that he died.” [CBS News, 12/13/2007] However, there are various allegations these detainees are tortured (see Mid-May 2002 and After, June 16, 2004, Shortly After September 6, 2006, and March 10-April 15, 2007). Some of the tapes are destroyed in 2005 (see November 2005) and there will be a media and political outcry when this is revealed in 2007 (see December 6, 2007).
May 2002-2003: CIA Uses Controversial Waterboarding Technique on Several High-Ranking Al-Qaeda Detainees
In 2007, it will be reported that the CIA used the controversial interrogation technique of waterboarding on at least three detainees. The Associated Press will claim the detainees are: Abu Zubaida, who is captured in March 2002 and tortured around May 2002 (see March 28, 2002 and Mid-May 2002 and After). Abd al-Rahim al-Nashiri, who is captured in November 2002 (see Early October 2002 and (November 2002)). Khalid Shaikh Mohammed (KSM), who is allegedly captured in early 2003 (see February 29 or March 1, 2003 and Shortly After February 29 or March 1, 2003). [Associated Press, 12/11/2007] NBC News will report a list of three that includes Hambali, who is captured in August 2003 (see August 12, 2003 and Shortly After August 12, 2003). NBC’s list also mentions KSM and Zubaida, but does not mention al-Nashiri. [MSNBC, 9/13/2007] In a 2007 book, former CIA Director George Tenet will hint that slightly more than three may have been waterboarded, writing, “The most aggressive interrogation techniques conducted by CIA personnel were applied to only a handful of the worst terrorists on the planet, including people who had planned the 9/11 attacks…” [Tenet, 2007, pp. 242] ABC News will claim in September 2007, “It is believed that waterboarding was used on fewer than five ‘high-value’ terrorist subjects…” [ABC News, 9/14/2007] Prior to 2002, waterboarding was classified by the US government as a form of torture, and treated as a serious criminal offense. US soldiers were court-martialled for waterboarding captives as recently as the Vietnam War. The technique is said to simulate death by drowning. [New Yorker, 8/6/2007] In the 1600s, King James I of England wrote about the torture his government was using and stated that waterboarding was the most extreme form of torture used, worse than the rack and thumbscrews. [Harper’s, 12/15/2007] In 2007, it will be revealed that at least some of the interrogations of Zubaida and al-Nashiri were videotaped, and it is suspected by some that their waterboarding may have been taped (see Spring-Late 2002). These tapes will later be destroyed under controversial circumstances (see November 2005). A government official will later claim that waterboarding is no longer used after 2003. The CIA and US military will prohibit the use of waterboarding in 2006. [Associated Press, 12/11/2007]
June 2002: CIA Claims to Get Vital Intelligence from Torture of Zubaida, but Others Claim His Leads Are Mostly Vague and Useless
In May 2002, the CIA began using new torture techniques on captured al-Qaeda leader Abu Zubaida (see Mid-May 2002 and After), and by June senior CIA officials prepare a preliminary report to determine whether Zubaida’s confessions are accurate or not. According to author Gerald Posner, they “found nothing that could definitively prove Zubaida a liar. And they had uncovered some minor corroborating evidence about the times and places of the meetings he had mentioned, which meant he could be telling the truth.” [Posner, 2003, pp. 192] Vanity Fair will later comment that the “CIA would go on to claim credit for breaking Zubaida, and celebrate [James] Mitchell”—the psychologist who devised the torture techniques used on Zubaida by the CIA (see Late 2001-Mid-March 2002, January 2002 and After, and Mid-April 2002)—“as a psychological wizard who held the key to getting hardened terrorists to talk. Word soon spread that Mitchell and [his business partner Bruce] Jessen had been awarded a medal by the CIA for their advanced interrogation techniques. While the claim is impossible to confirm, what matters is that others believed it. The reputed success of the tactics was ‘absolutely in the ether,’ says one Pentagon civilian who worked on detainee policy.” [Vanity Fair, 7/17/2007]
Much Intelligence Comes from His Possessions and FBI Interrogations – However, the reliability of Zubaida’s confessions remains controversial years later, and several factors complicate accessing their impact. For one, it appears that some of his most important confessions took place a month earlier when the FBI was interrogating him using rapport building instead of torture (see Late March through Early June, 2002). What the New York Times calls his two most notable confessions—that Khalid Shaikh Mohammed was the 9/11 mastermind and giving up the name of Jose Padilla, a militant living in the US—appear to come from this earlier period, although some accounts conflict. [New York Times, 6/27/2004; Suskind, 2006, pp. 116-117; New York Times, 9/10/2006; Vanity Fair, 7/17/2007] Furthermore, it is often not clear what was obtained from Zubaida’s confessions and what was obtained from his possessions. Journalist Ron Suskind will later write: “The phone numbers, computers, CDs, and e-mail address seized at Zubaida’s apartment now—a month after his capture—began to show a yield.… These higher-quality inputs were entered into big Cray supercomputers at NSA; many then formed the roots of a surveillance tree—truck to branches to limbs and buds.” [Suskind, 2006, pp. 116-117] So while it is said that information from Zubaida helped lead to the capture of al-Qaeda figures such as Ramzi bin al-Shibh, Abd al-Rahim al-Nashiri, Omar al-Faruq, and Ahmed Muhammad al-Darbi, it is unclear where this information came from exactly. [Washington Post, 6/27/2004] Additionally, it is not even clear if he provided such leads. For instance, it has been reported that the main break that led to bin al-Shibh’s capture had nothing to do with Zubaida (see June 14, 2002 and Shortly After). [Salon, 9/7/2006]
Zubaida Describes Vague and Unverifiable Plots – By most accounts, Zubaida’s confessions under torture around this time are frustratingly vague. He describes many planned attacks, such as al-Qaeda attacks on US shopping malls, banks, supermarkets, water systems, nuclear plants, apartment buildings, the Brooklyn Bridge, the Statue of Liberty, and more. Red alerts are sounded and thousands of law enforcement personnel are activated each time, but the warnings are too vague to lead to any arrests. Suskind will later comment that Zubaida’s information was “maybe nonsense, maybe not. There was almost no way to tell.” [Suskind, 2006, pp. 115-116, 121] But Suskind will later say more definitively: “[Zubaida] said, as people will, anything to make the pain stop. And we essentially followed every word and various uniformed public servants of the United States went running all over the country to various places that Zubaydah said were targets, and were not. Ultimately, we tortured an insane man and ran screaming at every word he uttered.” [Salon, 9/7/2006] Posner claims that Zubaida provided “false information intended to misdirect his captors.” For instance, “He caused the New York police to deploy massive manpower to guard the Brooklyn Bridge at the end of May [2002], after he told his interrogators that al-Qaeda had a plan to destroy ‘the bridge in the Godzilla movie.’” [Posner, 2003, pp. 191]
Link between Iraq, al-Qaeda – Perhaps the most important claims Zubaida makes, at least from the viewpoint of Bush administration officials, are his allegations of an operational relationship between Iraq and al-Qaeda. Some of Zubaida’s claims will later be leaked by administration officials, particularly his assertion that Osama bin Laden’s ally Abu Musab al-Zarqawi was working directly with Saddam Hussein to destabilize the autonomous Kurdish regime in northern Iraq (see December 2001-Mid-2002, October 2, 2002, and January 28, 2003). A former Pentagon analyst will later say: “I first saw the reports soon after Abu Zubaida’s capture. There was a lot of stuff about the nuts and bolts of al-Qaeda’s supposed relationship with the Iraqi Intelligence Service. The intelligence community was lapping this up, and so was the administration, obviously. Abu Zubaida was saying Iraq and al-Qaeda had an operational relationship. It was everything the administration hoped it would be.” Another Pentagon analyst will recall: “As soon as I learned that the reports had come from torture, once my anger had subsided I understood the damage it had done. I was so angry, knowing that the higher-ups in the administration knew he was tortured, and that the information he was giving up was tainted by the torture, and that it became one reason to attack Iraq.” [Vanity Fair, 12/16/2008]
Zubaida Appears to Be Feeding Interrogators’ Expectations – Dan Coleman, the FBI’s top al-Qaeda expert at the time who was able to analyze all the evidence from Zubaida, will later claim that the CIA “got nothing useful from the guy.” [Congressional Quarterly, 12/14/2007] Coleman will say: “The CIA wants everything in five minutes. It’s not possible, and it’s not productive. What you get in that circumstance are captives and captors playing to each other’s expectations, playing roles, essentially, that gives you a lot of garbage information and nothing you can use.” [Suskind, 2006, pp. 114] Given his low position in the jihadist hierachy, Coleman will add, Zubaida “would not have known that if it was true. But you can lead people down a course and make them say anything.” [Vanity Fair, 12/16/2008] Counterterrorism “tsar” General Wayne Downing is apparently intimately involved in Zubaida’s interrogation and will later recall: “[Zubaida] and some of the others are very clever guys. At times I felt we were in a classic counter-interrogation class: They were telling us what they think we already knew. Then, what they thought we wanted to know. As they did that, they fabricated and weaved in threads that went nowhere. But, even with these ploys, we still get valuable information and they are off the street, unable to plot and coordinate future attacks.” [Washington Post, 12/26/2002] In legal papers to prepare for a military tribunal hearing in 2007, Zubaida himself will assert that he told his interrogators whatever they wanted to hear to make the torture stop. [Washington Post, 12/18/2007]
