Bin Laden’s brother-in-law Mohammed Jamal Khalifa was arrested in the US in mid-December 1994 (see December 16, 1994-May 1995), and as he is held the evidence tying him to terrorism continues to grow: 
One week after his arrest, the State Department tells the immigration judge handling Khalifa’s case that he had “engaged in serious terrorist offenses” and that his release “would endanger US national security.” [Lance, 2006, pp. 158-159] In early January, police in the Philippines uncover the Bojinka plot, involving associates of Khalifa. A Philippine investigator makes a chart connecting the Bojinka figures and places Khalifa in the middle of it (see Spring 1995). The plot, if successful, would have killed thousands while also assassinating the Pope (see January 6, 1995). Meanwhile, The FBI translates literature in Khalifa’s luggage advocating training in assassination, explosives, and weapons, including discussions of the “wisdom of bombing churches and murdering Catholic priests.” [New York Times, 5/2/2002; Lance, 2003, pp. 233-35] Phone numbers to Khalifa’s Philippine charity fronts are found on bomber Ramzi Yousef’s laptop seized in early January 1995 as the Bojinka plot is exposed. Khalifa’s business card is found in the apartment Yousef was staying in as well. [Lance, 2006, pp. 158-159, 203] Bojinka plotter Wali Khan Amin Shah is arrested in early January 1995. He is found with multiple phone numbers for Khalifa. [Stephen Handelman, 7/31/1996; Lance, 2006, pp. 158-159] When Yousef is arrested in February 1995 (see February 7, 1995), he will be asked about Khalifa’s business card found in his apartment. According to an FBI report issued at the time, Yousef claims that he did not personally know Khalifa, but had been given the card by fellow Bojinka plotter Wali Khan Amin Shah as a contact in case he needed help. He also says that he is aware that Khalifa is a relative of Osama bin Laden. [Lance, 2006, pp. 203] In February and March, Philippine interrogation of one Bojinka plotter uncovers a planned second wave of attacks that would involve flying airplanes into US buildings, including the World Trade Center, CIA headquarters, and the Pentagon (see February-Early May 1995). This will eventually evolve into the 9/11 attacks. US investigators are notified about this sometime in the spring of 1995 (see Spring 1995). On April 1, Philippine authorities arrest six men and announce they are connected to Khalifa and Bojinka plotters such as Ramzi Yousef (see April 1, 1995-Early 1996). The Philippine Interior Secretary calls Khalifa a key figure in Islamic extremist efforts. [Associated Press, 4/16/1995] The Associated Press reports that Khalifa is believed to be “a key figure in efforts to recruit new members of the Abu Sayyaf group.” On April 4, the Abu Sayyaf raid a Christian town called Ipil and kill over fifty people in what is the group’s largest and most brutal terrorist attack (see April 4, 1995). This increases the importance of Khalifa’s ties with them. [Associated Press, 4/16/1995] Khalifa is accused by Yemen, Egypt, and Algeria of financing subversion in those countries. [Associated Press, 4/16/1995]
Despite all this evidence, Khalifa will soon be deported to Jordan for retrial there (see May 3, 1995-August 31, 1995), even though the key witness against him has already recanted. He will be found innocent and set free (see July 19, 1995).
1995 and After: Charities Connected to Bojinka Plot Remain Operating in the Philippines
In early 1995, the Bojinka plot, an early version of the 9/11 plot that would have killed thousands, is foiled in the Philippines (see January 6, 1995). It is quickly learned that Mohammed Jamal Khalifa, bin Laden’s brother-in-law, helped fund the plot while living in the Philippines as regional director of the Saudi-based charity, the Islamic International Relief Organization (IIRO). Wali Khan Amin Shah, a known bin Laden associate and Bojinka plotter, also was an employee of the IIRO in the Philippines. Yet the Philippine branch of the IIRO will remain open until 2000, apparently because of political pressure from Saudi Arabia. Even then, the IIRO is allowed to continue funding projects in the Philippines through a branch office in a neighboring country. One Philippine senior intelligence official will later complain, “We could not touch the IIRO.” [Institute of Defense and Strategic Studies, 3/7/2003 
] Counterterrorism expert Zachary Abuza will note that the IIRO is a “very well connected charity, whose supporters include the Saudi royal family and the top echelon of Filipino society.” One board member of “the IIRO Philippine office was, not coincidentally, the Saudi Ambassador.” [Contemporary Southeast Asia, 8/1/2003] In 1996, a secret CIA report will conclude that the IIRO is funding radical militant groups in many countries, including the Philippines, but the US will not move against it either (see January 1996). Another Philippines-based Islamic charity, the International Relations and Information Center (IRIC), is also connected to the Bojinka plot. The IRIC’s director is Ahmad al-Hamwi (better known by his alias Omar Abu Omar), who is the brother of Khalifa’s Philippine wife. Investigators determine that most of the funding for the Bojinka plot went through a bank account controlled by al-Hamwi. As a result, the IRIC is shut down in 1995 and al-Hamwi leaves the country. However, its operations and staff is taken over by another Islamic charity headed by Mohammed Amin al-Ghafari. Al-Ghafari is also a close associate of Khalifa and is believed to have been involved in the Bojinka plot as well (see June 1994). Al-Ghafari will finally be deported in 2002 after years of police protection (see October 8-November 8, 2002). [Washington Post, 12/30/2001; Institute of Defense and Strategic Studies, 3/7/2003 ; Australian, 4/8/2006] Al-Hamwi will be granted asylum in Australia in 1996 and will continue to live there even after media reports expose his presence there and his ties to Islamic militancy (see July 6, 1995-June 26, 1996). [Australian, 4/8/2006] US will finally officially declare the IIRO’s Philippine branch a terrorism funder in late 2006 (see August 3, 2006).
January 5, 1995: US Decides to Deport Bin Laden’s Brother-in-Law
The US decides to deport Mohammed Jamal Khalifa, bin Laden’s brother-in-law, who was arrested in the US in mid-December 1994 (see December 16, 1994-May 1995). Khalifa was sentenced to death in Jordan later in December and the Jordanian government wants the US to deport him to face retrial, even though Jordan does not have an extradition treaty with the US. On this day, Secretary of State William Christopher writes a letter to Attorney General Janet Reno: “Jordan is aware of Mr. Khalifa’s presence in the United States and has asked for our assistance in sending him to Jordan so that he may be brought to justice. To permit Mr. Khalifa to remain in the United States in these circumstances would potentially be seen as an affront to Jordan and at odd with many of the basic elements of our cooperative bilateral relationship [and] potentially undermine our longstanding and successful policy of international legal cooperation to bring about the prosecution of terrorists.” The next day, Deputy Attorney General Jamie Gorelick, acting for an absent Janet Reno, sends a letter supporting the deportation request. [Lance, 2006, pp. 160-161] Gorelick will later be named one of the ten 9/11 Commissioners. The 9/11 Commission will not discuss the decision to deport Khalifa at all. Victim’s relative Monica Gabrielle will later note, “Gorelick was one of those who wanted [the 9/11 Commission] to concentrate only on the last few years.” [Lance, 2006, pp. 169] In April 1995, Khalifa’s conviction will be overturned in Jordan after a key witness recants, making it highly probable Khalifa will be found innocent if deported there (see Early April 1995). But the US will go ahead with the deportation anyway, and Khalifa will be found innocent and set free (see April 26-May 3, 1995).
Before January 6, 1995: Bojinka Plotters under Surveillance, But Most Will Evade Arrest
It has widely been reported that the Bojinka plot was stopped by pure accident, days before plots to kill the Pope and thousands of airline passengers were to go forward (see January 6, 1995). Philippine policewoman Aida Fariscal is said to have made the first arrest by responding to a routine report of a fire in the Manila apartment where some of the plotters were staying. She chases Bojinka plotter Abdul Hakim Murad down the street and arrests him when he trips on a tree stump. [Washington Post, 12/30/2001] However, shortly after 9/11, the Philippine press will report that while the initial arrest may have been coincidental, Philippine intelligence was already monitoring Ramzi Yousef and the apartment where the fire took place. Rolando San Juan was reportedly an undercover agent monitoring Yousef and his apartment mate Murad. He was passing what he learned to his brother Erick San Juan, a special intelligence officer. One article concludes, “The role of the San Juan brothers is not known publicly and it is time the Philippine and US governments give them due credit for the unmasking of the activities of Murad and Yousef leading to their capture.” [Filipino Reporter, 10/11/2001] In 2002, the Los Angeles Times will discount the widely reported accidental fire story and say, “The truth about that night and the fire, officials say now, is a bit more complicated.… Government officials now say police, worried about the pope’s imminent arrival, started the fire that set off the alarm at the Josefa. When it sounded, the occupants ran out, the cops walked in and looked around. They then left and hunted down a search warrant.” [Los Angeles Times, 9/1/2002] It will also be later revealed that an undercover operative named Edwin Angeles actually worked with Yousef on the Bojinka plot while reporting to the Philippine government (see Late 1994-January 1995)), and other key Bojinka plotters such as Mohammed Jamal Khalifa, bin Laden’s brother-in-law, and Tariq Javid Rana were under intensive surveillance before the fire as well (see December 1, 1994 and December 1994-April 1995). It is not known what US intelligence may have been told about this surveillance, if anything. Despite all this surveillance, all the Bojinka plotters except Murad manage to escape, although many, such as Yousef, are arrested later (see February 7, 1995).
January 7-11, 1995: ’Intelligence Gold Mine’ Only Leads to Two More Arrests
After a late night raid of the Manila, Philippines, apartment central to the Bojinka plot (see January 6, 1995), investigators find what the Los Angeles Times will call “an intelligence gold mine.” [Los Angeles Times, 9/1/2002] Very quickly, a team of US intelligence agents joins Philippine investigators to sort through the evidence, which fills three police vans. Investigators are able to match fingerprints in the apartment with fingerprints on record for Ramzi Yousef, already believed to be the mastermind behind the 1993 World Trade Center bombing (see February 26, 1993). There are priests’ robes, pipe bombs, a dozen passports, chemicals, maps of the Pope’s planned route through Manila, and more. [Washington Post, 9/30/2001; Los Angeles Times, 9/1/2002] “The most damning information was gleaned from Yousef’s notebook computer, and four accompanying diskettes.” The data is encrypted and in Arabic, but technicians are quickly able to decipher and translate it. [Washington Post, 9/30/2001] Computer data includes “the names of dozens of associates, and photos of some; a record of five-star hotels; and dealings with a trading corporation in London, a meat market owner in Malaysia, and an Islamic center in Tucson, Ariz.… They describe how money moved through an Abu Dhabi banking firm.” [Washington Post, 9/23/2001] Photographs of all five operatives who would place bombs on airplanes are recovered from a deleted computer file. [Los Angeles Times, 5/28/1995] Wali Khan Amin Shah is identified from one of these five photos, plus a list of cell phone numbers found on the hard drive. He is traced to another Manila apartment and arrested on January 11. Under interrogation, Shah, who soon escapes from custody in unexplained circumstances (see January 13, 1995), confesses that most of the funds for the Bojinka plot were channeled to Yousef through a bank account belonging to Ahmad al-Hamwi, a Syrian working at the International Relations and Information Center (IRIC), a charity front run by Mohammed Jamal Khalifa, Osama bin Laden’s brother-in-law. [Washington Post, 9/30/2001] But despite these leads, Ramzi Yousef is the only other person successfully arrested based on all this data (and Yousef’s arrest will largely be due to an informant responding to an existing tip off program (see February 7, 1995)). The Philippine government will arrest other Bojinka plotters later in the year, including another one of the five operatives assigned to place bombs on the planes, but they will all be released (see April 1, 1995-Early 1996). Al-Hamwi is never arrested, while Khalifa is actually in US custody at the time of the Bojinka raid but is soon let go (see April 26-May 3, 1995). The IRIC will be closed down, but its operations are immediately taken over by another close associate of Khalifa (see 1995 and After).
February-Early May 1995: Bojinka Second Wave Fully Revealed to Philippines Investigators; Information Given to US
As Colonel Mendoza, the Philippines investigator, continues to interrogate Operation Bojinka plotter Abdul Hakim Murad, details of a post-Bojinka “second wave” emerge. Author Peter Lance calls this phase “a virtual blueprint of the 9/11 attacks.” Murad reveals a plan to hijack commercial airliners at some point after the effect of Bojinka dies down. Murad himself had been training in the US for this plot. He names the ten or so buildings that would be targeted for attack: CIA headquarters. The Pentagon. An unidentified nuclear power plant. The Transamerica Tower in San Francisco. The Sears Tower in Chicago. The World Trade Center. John Hancock Tower in Boston. US Congress. The White House. [Washington Post, 12/30/2001; Lance, 2003, pp. 278-280; Playboy, 6/1/2005]
Murad continues to reveal more information about this plot until he is handed over to the FBI in April (see April-May 1995). He also mentions that ten suicide pilots have already been chosen and are training in the US (see February 1995-1996). Mendoza uses what he learns from Murad and other sources to make a flow chart connecting many key al-Qaeda figures together (see Spring 1995). Philippine authorities later claim that they provide all of this information to US authorities, but the US fails to follow up on any of it. [Lance, 2003, pp. 303-4] Sam Karmilowicz, a security official at the US embassy in Manila, Philippines during this time period, will later claim that just before Murad was deported to the US in early May, he picked up an envelope containing all that the Philippine government had learned from Murad. He then sent the envelope to a US Justice Department office in New York City. He believes Mike Garcia and Dietrich Snell, assistant US attorneys who will later prosecute Murad, almost certainly had access to this evidence (see Early 1998). [CounterPunch, 3/9/2006]
February 8, 1995: Yousef Makes Partial Confession but Hides Bojinka Second Wave and Ties to Bin Laden and KSM
One day after Ramzi Yousef is arrested in Pakistan (see February 7, 1995), he makes a partial confession while being flown to the US. Due to the speed of events, only two US officials, FBI agent Chuck Stern and Secret Service agent Brian Parr, sit with Yousef during the flight. Both officials had been part of the Joint Terrorism Task Force (JTTF) operation to catch him, and they have many questions for him.
Confession – Yousef, under the mistaken impression that anything he says to them is not admissible in court if no notes or recordings are taken, talks to them for six hours. He confesses to bombing the WTC (see February 26, 1993). He says he tried to shear the support columns holding up one tower so it could fall into the other and kill up to 250,000 people. When asked who funded him, he says he had been given money by friends and family, but refuses to elaborate. [Reeve, 1999, pp. 107-109] In fact, the agents secretly take notes and they will be used as evidence in Yousef’s trial.
Comment on WTC – As Yousef is flying over New York City on his way to a prison cell, an FBI agent asks him, “You see the Trade Centers down there, they’re still standing, aren’t they?” Yousef responds, “They wouldn’t be if I had enough money and enough explosives.” [MSNBC, 9/23/2001; Miller, Stone, and Mitchell, 2002, pp. 135]
Some Information Forthcoming, Other Information Withheld – Yousef also soon admits to ties with Wali Khan Amin Shah, who fought with Osama bin Laden in Afghanistan, and Mohammed Jamal Khalifa, one of bin Laden’s brothers-in-law, who is being held by the US at this time (see December 16, 1994-May 1995). But although Yousef talks freely, he makes no direct mention of bin Laden, or the planned second wave of Operation Bojinka that closely parallels the later 9/11 plot (see Spring 1995). [Lance, 2003, pp. 297-98] He also fails to mention his uncle, Khalid Shaikh Mohammed (KSM), who is still at large and was a co-mastermind in most of Yousef’s plots. When talking about his preparations to assassinate President Clinton in Manila (see September 18-November 14, 1994), Yousef makes a vague mention of an “intermediary” who is actually KSM, but refuses to discuss him any further. [Gunaratna, 2003, pp. xxiv-xxv] However, Yousef’s arrest will soon lead investigators to KSM in other ways (see After February 7, 1995-January 1996).
Spring 1995: Flow Chart Given to US Connects Key Al-Qaeda Figures, but Not Followed Up
Philippines investigator Colonel Rodolfo Mendoza makes a remarkably accurate flow chart connecting many key operators in the Bojinka plot, and sends it to US investigators. The chart is based on what he is learning from interrogating Bojinka plotter Abdul Hakim Murad (see February-Early May 1995), while also drawing on a terrorism report he recently finished (see December 15, 1994) and debriefings of a key undercover operative (see Early February 1995). The chart identifies the following key organizations as being involved in the plot: Al-Harakat al-Islamiya. Meaning “Islamic Movement,” this is an apparently meaningless group name used by Ramzi Yousef and others to disguise their connections to al-Qaeda. Yousef also sometimes uses the equally meaningless name “The Liberation Army.” The Abu Sayyaf. This Philippine Muslim militant group is believed to help with the Bojinka plot that is also penetrated by Philippine intelligence (see Late 1994-January 1995). The chart mentions 20 Abu Sayyaf operatives trained by Yousef in 1992 (see December 1991-May 1992). [Lance, 2003, pp. 303-4] IRIC (International Research and Information Center). Most of the money for Bojinka is believed to flow through this charity front. The chart names the only three employees: Mohammed Jamal Khalifa (bin Laden’s brother-in-law), Abu Omar (whose real name is Ahmad al-Hamwi (see 1995 and After), and Dr. Zubair. Mendoza’s 1994 report names Abdul Salam Zubair as an Iraqi working as Khalifa’s assistant in running a number of charity fronts. [Japan Economic Newswire, 4/24/1995; Lance, 2003, pp. 303-4] Konsonjaya. Money for the Bojinka plot also flows through this Malaysian business front (see June 1994). Amien Mohammed (real name: Mohammed Amin al-Ghafari) is named and is one of the company directors. There is a link to Wali Khan Amin Shah, another company director. Hambali, a major al-Qaeda figure, is also a company director but is not included in the chart.
The chart also mentions many other key figures in the plot: Osama bin Laden, who is connected to the IRIC and Yousef’s group. “Usama Asmorai / Wali K” is Wali Khan Amin Shah. “Yousef / Adam Ali / A Basit” is Ramzi Yousef. “Salem Ali / Mohmad” is Khalid Shaikh Mohammed (KSM). Abdul Hakin Murad. [Lance, 2003, pp. 303-4] “Ibrahim Muneer / Munir.” Ibrahim Munir, a rich Saudi Arabian businessman, has close ties to bin Laden. He came to the Philippines in November and witnesses say he was Yousef’s constant companion. In 2003, it will be reported he is still wanted by authorities. [Miller, Stone, and Mitchell, 2002, pp. 139; Ressa, 2003, pp. 20] The names in hexagonal boxes are the girlfriends of the plotters. Some Bojinka money is transferred in their names.
However, despite the accurate information in this chart, only Shah, Yousef, and Murad will be caught before 9/11. Khalifa is actually in US custody at the time the US is given this chart (see December 16, 1994-May 1995), but he is allowed to be deported a short time later (see April 26-May 3, 1995). The US also learns about a connection between Konsonjaya and bin Laden by searching Yousef’s apartment. But the other Konsonjaya directors, including Hambali, will not be apprehended, and the IRIC will be allowed to continue functioning with the same staff after being taken over by another charity front connected to Khalifa (see 1995 and After). [Lance, 2003, pp. 303-4]
March 23, 1995: US Gives Up ‘Treasure Trove of Al-Qaeda Related Intelligence’
Osama bin Laden’s brother-in-law Mohammed Jamal Khalifa, who is being detained in the US, files a civil suit to have his possessions returned to him. These possessions, confiscated at the time of his arrest, include an address book and computer files linking him to Islamic militancy (see December 16, 1994-May 1995 and Late December 1994-April 1995). On this day, the Justice Department states that it has no objection to returning his possessions to him. Author Peter Lance will later call these possessions a “treasure trove of al-Qaeda related intelligence” that the US loses access to. While some or all of the material may have been copied, having the originals would increase their value in future trials. [Lance, 2006, pp. 162] Khalifa will be deported from the US with all his possessions in early May 1995 (see April 26-May 3, 1995).
Early April 1995: Jordan Acquits Bin Laden’s Brother-in-Law, But US Still Plans to Deport Him There
A Jordanian appeals court overturns the conviction of Mohammed Jamal Khalifa, bin Laden’s brother-in-law. A Jordanian court had convicted Khalifa and sentenced him to death in December 1994, shortly after he was arrested in the US (see December 16, 1994-May 1995). His conviction hinged on the testimony of one witness, a student at a school in the Philippines run by one of Khalifa’s organizations. The witness claimed that Khalifa had given him $50,000 to finance bombings and assassinations in Jordan. But when the case goes to the appeals court, the witness recants, and the court overturns the conviction. [Associated Press, 4/9/1995; Associated Press, 4/16/1995; San Francisco Chronicle, 4/18/1995] Shortly after the court’s ruling, Khalifa’s lawyer says that Khalifa wants to be deported to Jordan and retried in person. He is confident a new trial will end in his acquittal. [Associated Press, 4/26/1995] The US will deport Khalifa to Jordan about one month later (see April 26-May 3, 1995). He will quickly be retried, found innocent, and set free (see July 19, 1995).
