During Michael Scheuer’s time as head of the CIA’s bin Laden unit Alec Station from 1996 to 1999 (see February 1996 and June 1999), the unit has conflicts with other parts of the US intelligence community. Scheuer has an angry and dogmatic style that sometimes alienates people.
Conflict with Counterterrorism ‘Tsar’ Clarke – Scheuer and Richard Clarke, the US counterterrorism “tsar,” do not get along, even though both are among the first people in government to take the Osama bin Laden threat seriously. Clarke can also be abrasive. One former CIA insider will later say, “I can say that, among individuals that I tend to trust, Clarke was regarded as more serious about terrorism in the 1990s than just about anybody else in the US government, but he was a truly painful individual to work with.” Clarke will later similarly criticize Scheuer, saying: “Throwing tantrums and everything doesn’t help.… [You shouldn’t be] so dysfunctional within your agency that you’re making it harder to get something done.” And Scheuer will later criticize Clarke, saying: “[He] was an interferer of the first level, in terms of talking about things that he knew nothing about and killing them.… He was always playing the FBI off against us or us against the NSA.”
Conflict with the FBI – The bin Laden unit does not get along with some FBI agents assigned to it as well. From the very start, some FBI officials, including bin Laden expert John O’Neill, resist cooperating with the unit. CIA official John MacGaffin will later claim, “O’Neill just fought it and fought it [cooperating with Alec Station].” O’Neill and Scheuer “were at each other’s throats.” On one occasion an FBI agent at the bin Laden unit is caught hiding CIA files inside his shirt to take them back to O’Neill. Scheuer will also claim that the FBI rarely follows up leads the bin Laden unit sends it. Furthermore, the FBI never shares information. “I bet we sent 700 or 800 requests for information to the FBI, and we never got an answer to any of them,” Scheuer says.
Conflicts with CIA Higher-Ups – The bin Laden unit also has conflicts with others within the CIA, including powerful superiors. An incident in 1996 leads to a breakdown of trust between Scheuer and his superiors (see 1996). John MacGaffin, who is a top CIA official for clandestine operations at the time, will later say of Scheuer, “He’s a good guy, [but] he’s an angry guy.”
Situation Improves after Scheuer – In June 1999, Richard Blee replaces Scheuer as head of the bin Laden unit, and he will stay involved in the bin Laden issue until after 9/11 (see December 9, 2001). Vanity Fair will later comment that Blee “was just as heated up over bin Laden as Scheuer had been, but obviously less likely to cause the kind of friction that would discomfit the [CIA director].” [Vanity Fair, 11/2004]
Between May and December 1996: NSA Discovers Al-Qaeda Communications Hub
The NSA discovers a communications hub al-Qaeda uses to coordinate its global operations. The hub was set up in May 1996 by Ahmed al-Hada, a close associate of Osama bin Laden (see May 1996), and is discovered at some time in the next six months. [Bamford, 2008, pp. 16] According to a PBS documentary, the NSA discovers the hub by monitoring bin Laden’s calls from his satellite phone in Afghanistan (see November 1996-Late August 1998): “Once he starts dialing from Afghanistan, NSA’s listening posts quickly tap into his conversations.… By tracking all calls in and out of Afghanistan, the NSA quickly determines bin Laden’s number: 873-682505331.” According to CIA manager Michael Scheuer, bin Laden’s satellite phone is a “godsend,” because “[i]t gave us an idea, not only of where he was in Afghanistan, but where al-Qaeda, as an organization, was established, because there were calls to various places in the world.” As bin Laden’s phone calls are not encrypted, there is no code for the NSA to break. Instead, NSA voice interceptors and linguists translate, transcribe, and write summaries of the calls. In addition, human analysts plot out which numbers are being called from bin Laden’s phone and how frequently. [PBS, 2/3/2009]
July 18, 1996: State Department Calls Afghanistan an ‘Ideal Haven’ for Bin Laden
State Department analysts warn the Clinton administration in a top secret assessment that bin Laden’s move from Sudan to Afghanistan will offer him an “ideal haven.” The warning comes exactly one month after he made the move (see May 18, 1996). Analysts say that “his prolonged stay in Afghanistan – where hundreds of ‘Arab mujaheddin’ receive terrorist training and key extremist leaders often congregate – could prove more dangerous to US interests in the long run than his three-year liaison with Khartoum,” in Sudan. Further, bin Laden’s public statements suggest an “emboldened” man capable of “increased terrorism.” Michael Scheuer, head of the CIA’s bin Laden unit at the time, will later comment, “The thinking was that he was in Afghanistan, and he was dangerous, but because he was there, we had a better chance to kill him. But at the end of the day, we settled for the worst possibility – he was there and we didn’t do anything.” [New York Times, 8/17/2005]
September 5, 1996: Bojinka Defendants Convicted; Trial Ignores 9/11 Blueprint Plot
Ramzi Yousef and two other defendants, Abdul Hakim Murad and Wali Khan Amin Shah, are convicted of crimes relating to Operation Bojinka (see January 6, 1995). [CNN, 9/5/1996] In the nearly 6,000-page transcript of the three-month Bojinka trial, there is not a single mention of the “second wave” of Bojinka that closely paralleled the 9/11 plot. Interrogations by Philippine investigator Colonel Rodolfo Mendoza had exposed the details of this plot quite clearly (see January 20, 1995 and February-Early May 1995). However, not only does the FBI not call Mendoza to testify, but his name is not even mentioned in the trial, not even by his assistant, who does testify. “The FBI seemed to be going out of its way to avoid even a hint of the plot that was ultimately carried out on 9/11,” author Peter Lance will later note. [Lance, 2003, pp. 350-51] Murad was extensively tortured during his imprisonment in the Philippines (see After January 6, 1995), and some observers such as law professor Alan Dershowitz will assert that Murad’s case proves the reliability of torture, claiming that Murad’s torture prevented a major disaster. However, others disagree. Law professor Stephanie Athey, in her examination of the case, will write in 2007 that Murad’s torture actually produced little useful information. A computer found in Murad’s apartment held key details of the plot (see January 7-11, 1995 and Spring 1995). CIA agent Michael Scheuer will later say that the information collected from Murad’s apartment, not the information gleaned from Murad’s torture, provided actual useful intelligence. [Vanity Fair, 12/16/2008]
Late 1996: CIA Definitively Confirms Bin Laden Is Not Just Financier, but US Is Slow to Act
By late 1996, the CIA definitively confirms that Osama bin Laden is more of a leader of militants worldwide than just a financier of them. [US Congress, 7/24/2003] CIA Director George Tenet will later comment, “By 1996 we knew that bin Laden was more than a financier. An al-Qaeda defector [Jamal al-Fadl] told us that [bin Laden] was the head of a worldwide terrorist organization with a board of directors that would include the likes of Ayman al-Zawahiri and that he wanted to strike the United States on our soil” (see June 1996-April 1997). [Tenet, 2007, pp. 102] Yet the US will not take “bin Laden or al-Qaeda all that seriously” until after the bombing of US embassies in Africa in 1998. [Miller, Stone, and Mitchell, 2002, pp. 213] Dan Coleman, the FBI’s top al-Qaeda expert, helps interrogate al-Fadl in 1996 and 1997 (see June 1996-April 1997), and Coleman comes to the conclusion that the US is facing a profound new threat. But according to journalist Robert Wright, Coleman’s reports “met with little response outside a small circle of prosecutors and a few people in the [CIA and FBI] who took an interest…” Michael Scheuer, head of the CIA’s bin Laden unit, is interested, as is John O’Neill, who heads the New York FBI office that specializes in bin Laden cases. But O’Neill and Scheuer hate each other and do not cooperate. [Wright, 2006] Al-Fadl’s information will not turn into the first US indictment of bin Laden until June 1998 (see June 8, 1998).
December 1996: CIA Discovers Al-Qaeda Communications Hub, NSA Fights to Cut off Its Access
Alec Station, the CIA’s bin Laden unit, discovers that al-Qaeda has established a communications hub and operations center in Sana’a, Yemen, and that there are frequent calls between it and Osama bin Laden in Afghanistan (see May 1996 and November 1996-Late August 1998). [Antiwar, 10/22/2008; PBS, 2/3/2009] According to Alec Station chief Michael Scheuer, the CIA learns of this “communications conduit” through a CIA officer detailed to the NSA and stationed overseas. According to Scheuer, the NSA “refuse[s] to exploit the conduit and threaten[s] legal action against the agency officer who advised of its existence.” Despite the threat, the officer continues to supply the information. Scheuer asks senior CIA officials to intervene with the NSA, but this only leads to “a desultory interagency discussion without resolution.” [Atlantic Monthly, 12/2004] Author James Bamford will say: “Scheuer knew how important the house [the operations center in Yemen] was, he knew NSA was eavesdropping on the house. He went to NSA, went to the head of operations for NSA,… Barbara McNamara, and asked for transcripts of the conversations coming into and going out of the house. And the best the NSA would do would be to give them brief summaries every… once a week or something like that, you know, just a report, not the actual transcripts or anything. And so he got very frustrated, he went back there and they still refused.” [Antiwar, 10/22/2008] Because of the lack of information, the CIA will actually build its own listening post to get some of the information the NSA is concealing from it (see After December 1996).
December 1996-June 1999: US Military Fails to Help CIA Plan Operations Against Bin Laden
The CIA’s bin Laden unit repeatedly and formally requests assistance from the US military to help plan operations against bin Laden and al-Qaeda. Michael Scheuer, the head of the unit, later will recall, “We needed and asked for special operations officers.” But even after the US embassy bombings in August 1998, cooperation is not forthcoming. Finally, in June 1999, the unit is sent individuals who are not special operations officers and only have experience on Iran. Scheuer later will complain, “The bin Laden unit received no support from senior [CIA] officials vis-a-vis the US military.” Scheuer is fired from the unit in June 1999, so presumably his first-hand knowledge of relations between the CIA and Pentagon ends at this time. [Atlantic Monthly, 12/2004]
Late 1996: Effort to Get Nukes Makes Al-Qaeda Clear Threat, CIA Management Tries to Suppress Report
Alec Station, the CIA’s bin Laden unit, writes a report based on information from al-Qaeda defector Jamal al-Fadl saying that al-Qaeda intends to get nuclear weapons (see Late 1993). [Shenon, 2008, pp. 190] Alec Station chief Michael Scheuer will write in 2004 that, by this time, his unit has “acquired detailed information about the careful, professional manner in which al-Qaeda [is] seeking to acquire nuclear weapons… there could be no doubt after this date that al-Qaeda [is] in deadly earnest in seeking nuclear weapons.” [Atlantic Monthly, 12/2004] Scheuer will add that due to al-Qaeda’s “extraordinarily sophisticated and professional effort to acquire weapons of mass destruction… by the end of 1996, it [is] clear that this [is] an organization unlike any other one we had ever seen.” [CBS News, 11/14/2004] The 50-paragraph report, which describes in detail how Osama bin Laden sought the scientists and engineers he needed to acquire enriched uranium and then weaponize it, is sent to CIA headquarters. However, Scheuer’s superiors refuse to distribute the report, saying it is alarmist. Instead, only two of the paragraphs are circulated, buried in a larger memo. [Shenon, 2008, pp. 190] However, according to Scheuer: “Three officers of the [CIA]‘s bin Laden cadre [protest] this decision in writing, and [force] an internal review. It [is] only after this review that this report [is] provided in full to [US intelligence] leaders, analysts, and policymakers.” [Atlantic Monthly, 12/2004] The memo’s final distribution will come about a year after it is written. [Shenon, 2008, pp. 190]
1997: CIA Establishes Renditions Branch, Helps with Up to 70 Renditions Before 9/11
A Renditions Branch is established at the CIA’s Counterterrorist Center. Its job is to find militant leaders and then assist their abduction. The US government has been rendering suspects for four years (see 1993), and the CIA has had a dedicated program for this since the summer of 1995 (see Summer 1995). [9/11 Commission, 7/24/2004, pp. 276] Although some specific rendition operations are known (see Summer 1998, July 1998-February 2000, and Late August 1998), the total before 9/11 is not. Estimates vary, but generally fall into a similar range: 
Citing a public statement by CIA Director George Tenet, 9/11 commission deputy executive director Chris Kojm will say “70 terrorists were rendered and brought to justice before 9/11;” Shortly after this, Tenet himself will confirm there were “over 70” renditions; [9/11 Commission, 3/24/2004] Tenet will also say “many dozen” suspects were rendered before 9/11; [Central Intelligence Agency, 3/24/2004] The 9/11 Congressional Inquiry will say that the Branch is involved in “several dozen” renditions before 9/11; [US Congress, 7/24/2003, pp. 728 
] Michael Scheuer, a CIA manager responsible for operations against Osama bin Laden, will say that between 1995 and May 1999 “[t]he operations that I was in charge of concerned approximately 40 people…” [CounterPunch, 7/1/2006]
Early 1997: CIA Unit Determines Bin Laden Is Serious Threat, But Cooperation Is Poor
By the start of 1997, Alec Station, the CIA unit created the year before to focus entirely on bin Laden (see February 1996), is certain that bin Laden is not just a financier but an organizer of terrorist activity. It is aware bin Laden is conducting an extensive effort to get and use a nuclear weapon (see Late 1996). It knows that al-Qaeda has a military committee planning operations against US interests worldwide. However, although this information is disseminated in many reports, the unit’s sense of alarm about bin Laden isn’t widely shared or understood within the intelligence and policy communities. Employees in the unit feel their zeal attracts ridicule from their peers. [9/11 Commission, 3/24/2004] Some higher-ups begin to deride the unit as hysterical doomsayers, and refer to the unit as “The Manson Family.” Michael Scheuer, head of the unit until 1999, has an abrasive style. He and counterterrorism “tsar” Richard Clarke do not get along and do not work well together. Scheuer also does not get along with John O’Neill, the FBI’s most knowledgeable agent regarding bin Laden. The FBI and Alec Station rarely share information, and at one point an FBI agent is caught stuffing some of the unit’s files under his shirt to take back to O’Neill. [Vanity Fair, 11/2004]
