Muhammad Naeem Noor Khan, a young Pakistani, is arrested in Lahore after six weeks of surveillance by Pakistani authorities in conjunction with US intelligence agencies. The US and Pakistanis learned of Noor Khan after arresting another al-Qaeda suspect, Musaad Aruchi, a month before (see June 12, 2004), and they had been tracking him since then. Noor Khan is taken to a high-security prison by Pakistani authorities, who resisted pressure from the CIA to let them completely handle the operation. [Guardian, 8/8/2004] American intelligence agents find what they later call a “treasure trove” of information in Noor Khan’s computers and documents. [CNN, 8/2/2004] Khan is a communications hub of sorts for al-Qaeda. He is in frequent contact with dozens of other al-Qaeda terrorists around the world and passing messages back and forth from more senior al-Qaeda operatives. Former National Security Council official Gideon Rose will later say, “It is obviously a very serious victory. It is obvious that there is a real find here.” [Guardian, 8/8/2004] Khan, who speaks fluent English, is not just a center for expediting clandestine communications between al-Qaeda leaders and their underlings, but also handles and collates documents, reports, maps, and other information, and sometimes performs his own intelligence-gathering, usually on trips to Britain. [MSNBC, 8/8/2004] Khan’s computer contains detailed surveillance information about five US buildings—the Stock Exchange and Citigroup’s headquarters in New York City, the Prudential building in Newark, and the International Monetary Fund and World Bank headquarters in Washington—all possible targets for future al-Qaeda attacks, though the information is all from 2000 and 2001. Other sites in New York City and San Francisco are mentioned, and meticulous information about London’s Heathrow Airport is also found. Pakistani intelligence officials believe that the information indicates a “present” threat, and so inform their US counterparts. Later in the month, the Pakistanis convince Khan to “turn,” or become a double agent. Khan will subsequently send e-mails to dozens of operatives all requesting that they contact him immediately (see July 24-25, 2004). [Guardian, 8/8/2004]
Mid-July 2004: 9/11 Commission Staffers Worried about Impact of Newly Discovered Information about Iran on Political Situation
After discovering information possibly linking Iran and Hezbollah to travel by the 9/11 hijackers in 2000 and early 2001 (see January-June 2004), the 9/11 Commission becomes worried about the impact the information might have on the current political situation. The material was discovered in NSA files late on in the commission’s investigation, as the commission initially paid little attention to the NSA (see Late 2002-July 2004 and Between July 1 and July 17, 2004). Commission staffers are worried because the information about the Iran links is not conclusive and the reports about it “might raise as many questions as they would answer.” In addition, they are aware that faulty intelligence had contributed to the decision to invade Iraq, and “the Bush administration seem[s] eager to engage in saber rattling with Iran.” However, commission chairman Tom Kean comments on the Iran information in the press and these comments become headline news (see July 16, 2004). [Shenon, 2008, pp. 373] The relevant passages in the final report point out that apparent links between travel by the future 9/11 hijackers and Hezbollah officials could be a “coincidence” and that al-Qaeda detainees have stated the only reason for traveling through Iran was because it did not place telltale stamps in passports. In addition, the report says that there is “no evidence that Iran or Hezbollah was aware of the planning for what later became the 9/11 attack,” and that the “topic requires further investigation by the US government.” [9/11 Commission, 7/24/2004, pp. 240-1]
Mid-July 2004: White House Chief of Staff Likes 9/11 Commission Report, Thinks It Proves No Threat to Bush
White House chief of staff Andy Card learns what the 9/11 Commission Report contains before it is published, as the various chapters are sent to the White House for classification review before the publication date. Card then hears back from the review teams. Despite fears about allegations made by former counterterrorism “tsar” Richard Clarke (see March 21, 2004) and a key Presidential Daily Brief item (see August 6, 2001), in the words of author Philip Shenon, Card can see “that the Commission’s final report posed no threat to [President] Bush’s re-election.” This is because the report does not “single out individuals for blame. Certainly not George Bush.” The allegations by Clarke, related in a “he-said, she-said” manner in the report, also do not damage National Security Adviser Condoleezza Rice. [Shenon, 2008, pp. 411]
July 16, 2004: 9/11 Commission Chairman’s Comments Lead to Flurry of Reporting on Iran, None on Pakistan
Shortly before the 9/11 Commission is due to release its final report (see July 22, 2004), Commission Chairman Thomas Kean says, “We believe.… that there were a lot more active contacts, frankly, [between al-Qaeda and] Iran and with Pakistan than there were with Iraq.” [Time, 7/16/2004] This is based on a review of NSA material performed by one commission staffer (see January-June 2004) and a day trip to NSA headquarters by a group of staffers to examine material there (see Between July 1 and July 17, 2004). [Shenon, 2008, pp. 155-7, 370-373] The US media immediately runs prominent stories on the Commission’s evidence regarding Iran and nearly completely ignores evidence regarding Pakistan. The Commission’s final report mentions that around ten of the hijackers passed through Iran in late 2000 and early 2001. At least some Iranian officials turned a blind eye to the passage of al-Qaeda agents, but there was no evidence that the Iranian government had any foreknowledge or involvement in the 9/11 plot (see Mid-July 2004). [Time, 7/16/2004; Reuters, 7/18/2004] In the wake of these findings, President Bush states of Iran, “As to direct connections with September 11, we’re digging into the facts to determine if there was one.” This puts Bush at odds with his own CIA, which has seen no Iran-9/11 ties. [Los Angeles Times, 7/20/2004] Bush has long considered Iran part of his “axis of evil,” and there has been talk of the US attacking or overthrowing the Iranian government. [Reuters, 7/18/2004] Provocative articles appear, such as one in the Daily Telegraph titled, “Now America Accuses Iran of Complicity in World Trade Center Attack.” [Daily Telegraph, 7/18/2004] Yet, while this information on Iran makes front page news in most major newspapers, evidence of a much stronger connection between Pakistan and 9/11 is nearly completely ignored. For instance, only UPI reports on a document suggesting high-level Pakistani involvement in the 9/11 attacks that is revealed this same week. [United Press International, 7/22/2004] Furthermore, the 9/11 Commission’s final report will contain almost nothing on Pakistan’s ties to al-Qaeda, despite evidence given to the Commission that, according to one commissioner speaking to the Los Angeles Times, showed that Pakistan was “up to their eyeballs” in intrigue with al-Qaeda. [Los Angeles Times, 7/16/2004; 9/11 Commission, 7/24/2004]
Shortly before July 22, 2004: 9/11 Commission Debates Referring Military and Aviation Officials to Justice Department for Criminal Investigation
Towards the end of its tenure, the ten members of the 9/11 Commission secretly meet to discuss whether military and aviation officials deliberately misled them and the public. For over two years following 9/11, NORAD and the FAA had given information in testimony and media appearances later found to be incorrect. Authorities claimed that America’s air defenses reacted quickly on 9/11, with fighters launched in response to the last two hijackings and ready to shoot down Flight 93 if it threatened Washington, DC. Yet audiotapes from the FAA and NORAD obtained by the commission under subpoena showed that the military never had any of the hijacked airliners in its sights and only became aware of Flight 93 after it crashed. John Farmer, a senior counsel to the commission, says the military’s original story was “a whole different order of magnitude than spin. It simply wasn’t true.” The commissioners debate whether to refer the matter to the Justice Department for criminal investigation, but as a compromise they instead refer it to the inspectors general for the Pentagon and the Transportation Department (which includes the FAA). The Pentagon inspector general’s office will issue a secret report to Congress in May 2005, blaming the inaccuracies partly on “inadequate forensic capabilities,” including poor log keeping at the military air traffic control centers (see May 27, 2005). However, Farmer and other commission staff will later point out that the military had already reviewed the NORAD audiotapes before its officials gave their inaccurate testimonies. The 9/11 Commission’s concerns over whether it was deliberately misled will only come to light in news reports in August 2006. Thomas Kean, its former chairman, will say, “We to this day don’t know why NORAD told us what they told us. It was just so far from the truth.” [Vanity Fair, 8/1/2006; Washington Post, 8/2/2006; New York Times, 8/5/2006] The Transportation Department’s inspector general’s office will issue its report in response to the commission’s referral in September 2006 (see September 1, 2006).
July 19, 2004: News of Former National Security Adviser’s Document Theft Is Leaked to Press
News of a document theft from the National Archives by Sandy Berger, a former national security adviser in the Clinton administration, is leaked to the press. Berger took copies of a document because he thought it might be used against either himself or Clinton, but was caught by archives staffers (see September 2, 2003 and October 2, 2003). He has been under investigation by the Justice Department for several months. The leak comes several days before the 9/11 Commission is due to publish its final report (see July 22, 2004), and the commissioners and their staff assume that that the news is leaked by the White House, because it is “eager to suggest that Berger’s acts had deprived the 9/11 Commission of information that might have embarrassed him and the Clinton administration.” Berger immediately steps down as an adviser to the campaign of Democratic presidential candidate John Kerry. [Shenon, 2008, pp. 413-414]
Shortly Before July 22, 2004: Vice President Cheney Demands Changes to 9/11 Commission Report regarding Shootdown Order on 9/11
Vice President Dick Cheney is furious that the 9/11 Commission is going to conclude in its final report that it does not believe he has been telling the full truth about his actions on the morning of September 11, and tries to get the report rewritten on the eve of its release. Since late June, each completed chapter of the 9/11 Commission Report has been forwarded to the White House for a declassification review by a team of intelligence specialists assembled by White House chief of staff Andrew Card. According to author Philip Shenon, “Cheney and his counsel, David Addington, [are] outraged by the Commission’s timeline on Cheney’s actions on September 11—and the clear suggestion that Cheney had issued an unconstitutional shootdown order that morning without Bush’s knowledge or approval.” Members of the Commission’s staff had become convinced that the decision to authorize the military to shoot down threatening aircraft was made by Cheney alone, not by President Bush (see (Mid 2004)). A few days before the 9/11 Commission Report is to be released, an angry Cheney phones Thomas Kean, the chairman of the Commission. Cheney complains, “Governor, this is not true, just not fair.” He says he finds it startling that the Commission does not accept his word and that of President Bush: “The president has told you, I have told you, that the president issued the order. I was following his directions.” Cheney demands that the relevant sections of the report be rewritten. Kean promises that he will ask the Commission’s staff to review the material about the shootdown order again before the report is published. According to Shenon, “no major changes” are subsequently made in response to Cheney’s complaint. [Shenon, 2008, pp. 265 and 411-412] The White House had previously successfully lobbied the Commission to water down one of its staff reports that dealt with the shootdown authorization (see June 15, 2004). [Newsweek, 6/27/2004]
July 22, 2004: Evidence the ISI Was ‘Fully Involved’ in the 9/11 Plot Is Ignored by 9/11 Commission
UPI reports that the 9/11 Commission has been given a document from a high-level, publicly anonymous source claiming that the Pakistani “ISI was fully involved in devising and helping the entire [9/11 plot].” The document blames Gen. Hamid Gul, a former ISI Director, as being a central participant in the plot. It notes that Gul is a self-avowed “admirer” of bin Laden. An anonymous, ranking CIA official says the CIA considers Gul to be “the most dangerous man” in Pakistan. A senior Pakistani political leader says, “I have reason to believe Hamid Gul was Osama bin Laden’s master planner.” The document further suggests that Pakistan’s appearance of fighting al-Qaeda is merely an elaborate charade, and top military and intelligence officials in Pakistan still closely sympathize with bin Laden’s ideology. [United Press International, 7/22/2004] However, the 9/11 Commission final report released a short time later will fail to mention any of this. [9/11 Commission, 7/24/2004]
July 22, 2004: Prominent Figures See Ties Between the ISI, 9/11, and Even the CIA
Michael Meacher, a British member of Parliament, and a cabinet minister in Tony Blair’s government until 2003, writes in the Guardian, “Significantly, [Saeed] Sheikh is… the man who, on the instructions of General Mahmood Ahmed, the then head of Pakistan’s Inter-Services Intelligence (ISI), wired $100,000 before the 9/11 attacks to Mohamed Atta, the lead hijacker. It is extraordinary that neither Ahmed nor Sheikh have been charged and brought to trial on this count. Why not?” Daniel Ellsberg, the “Pentagon Papers” whistleblower during the Nixon presidency, states in the same article, “It seems to me quite plausible that Pakistan was quite involved in [9/11]… To say Pakistan is, to me, to say CIA because… it’s hard to say that the ISI knew something that the CIA had no knowledge of.”
[Guardian, 7/22/2004]
July 22, 2004: 9/11 Commission’s Final Report Is Released; Conclusions are ‘Gentle’ on Bush Administration
The 9/11 Commission completes its work and releases its final report. They blame incompetence for the reason why the US government did not prevent the attack. The Washington Post summarizes the report, “The US government was utterly unprepared on Sept. 11, 2001, to protect the American people from al-Qaeda terrorists.” [Washington Post, 7/23/2004] The report itself states, “We believe the 9/11 attacks revealed four kinds of failures: in imagination, policy, capabilities, and management.” [9/11 Commission, 7/24/2004] The Washington Post reports, “Though openly dreaded for months by many Republicans and quietly feared by the White House, the report was much gentler on the Bush administration than they feared. Rather than focus criticism on the Bush administration, the commission spread the blame broadly and evenly across two administrations, the FBI, and Congress.” [Washington Post, 7/23/2004] More to the point, as former counterterrorism “tsar” Richard Clarke notes in a New York Times editorial, “Honorable Commission, Toothless Report,” because the commission wanted a unanimous report from a bipartisan group, “it softened the edges and left it to the public to draw many conclusions.” [New York Times, 7/25/2004] The Washington Post comments, “In many respects, the panel’s work has been closer to the fact-finding, conspiracy-debunking Warren Commission of the mid-1960s, which investigated the assassination of President John F. Kennedy, than to the reform-oriented Church Commission, which exposed assassination plots and CIA abuses during the mid-1970s.” [Washington Post, 7/18/2004]


